RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 MALLQ13021 153 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 MEP1BQ16820 701 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 DEFB112Q30KQ8 113 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 ZNF362Q5T0B9 420 aaPredicted RBP13.78□□□□□ -0.2
TSR3-202ENST00000566296 HIST2H3PS2Q5TEC6 136 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 WDR25Q64LD2 544 aaPredicted RBP13.78□□□□□ -0.2
TSR3-202ENST00000566296 FAHD1Q6P587 224 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 CORO6Q6QEF8 472 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 CD300LDQ6UXZ3 194 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 BRD3OSQ6XYD6 125 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 C17orf107Q6ZR85 190 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 HIST2H3AQ71DI3 136 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 CELF2-AS1Q8N7Q2 184 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 OR4F5Q8NH21 305 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 FANK1Q8TC84 345 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 TAF15Q92804 592 aaKnown RBP eCLIP13.78□□□□□ -0.2
TSR3-202ENST00000566296 C9orf16Q9BUW7 83 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 RNPEPL1Q9HAU8 725 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 NOP16Q9Y3C1 178 aaKnown RBP13.78□□□□□ -0.2
TSR3-202ENST00000566296 PKD1L1Q8TDX9 2849 aa13.78□□□□□ -0.2
TSR3-202ENST00000566296 F5H5K5 113 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 PPP1R3DO95685 299 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 RENP00797 406 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 HLA-DPB1P04440 258 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 PRKACGP22612 351 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 CDKN2AP42771 156 aaKnown RBP13.77□□□□□ -0.21
TSR3-202ENST00000566296 NPY4RP50391 375 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 RAD23AP54725 363 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 FGF12P61328 243 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 KCNJ8Q15842 424 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 SLC36A3Q495N2 470 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 RPL13AP3Q6NVV1 102 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 SMARCD3Q6STE5 483 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 OR2AJ1Q8NGZ0 328 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 Q8TCH9 128 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 EME1Q96AY2 570 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 TSSK2Q96PF2 358 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 TECTBQ96PL2 329 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 PITX2Q99697 317 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 CIB1Q99828 191 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 NIPSNAP1Q9BPW8 284 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 RBM4BQ9BQ04 359 aaKnown RBP13.77□□□□□ -0.21
TSR3-202ENST00000566296 BEX1Q9HBH7 125 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 NOX4Q9NPH5 578 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 TNFRSF19Q9NS68 423 aa13.77□□□□□ -0.21
TSR3-202ENST00000566296 IGLV1-36A0A0B4J1U3 117 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 FAM20BO75063 409 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 PMELP40967 661 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 CD200P41217 278 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 RAG2P55895 527 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 PRSS12P56730 875 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 SLC34A1Q06495 639 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 ECH1Q13011 328 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 MIDNQ504T8 468 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 PRAMEF6Q5VXH4 476 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 COLCA1Q6ZS62 124 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 RASSF6Q6ZTQ3 369 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 PGAP1Q75T13 922 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 MRPL21Q7Z2W9 205 aaKnown RBP13.76□□□□□ -0.21
TSR3-202ENST00000566296 LINC00346Q8IVM7 164 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 SPRYD4Q8WW59 207 aaPredicted RBP13.76□□□□□ -0.21
TSR3-202ENST00000566296 WFDC12Q8WWY7 111 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 ERMAPQ96PL5 475 aaPredicted RBP13.76□□□□□ -0.21
TSR3-202ENST00000566296 ATF6BQ99941 703 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 CDADC1Q9BWV3 514 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 MARCH7Q9H992 704 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 C8orf4Q9NR00 106 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 UFSP2Q9NUQ7 469 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 ENOPH1Q9UHY7 261 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 B9D1Q9UPM9 204 aa13.76□□□□□ -0.21
TSR3-202ENST00000566296 CMYA5Q8N3K9 4069 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 A0A1B0GWJ7 208 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 FAM181BA6NEQ2 426 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 C22orf46C9J442 243 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 P2RY10O00398 339 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 DCTN6O00399 190 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 CASQ2O14958 399 aaPredicted RBP13.75□□□□□ -0.21
TSR3-202ENST00000566296 ATP6V1G2O95670 118 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 LCATP04180 440 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 ACSM4P0C7M7 580 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 SLC6A6P31641 620 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 DAPP51397 102 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 FXYD6P3P58550 94 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 MAB21L1Q13394 359 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 GK2Q14410 553 aaPredicted RBP13.75□□□□□ -0.21
TSR3-202ENST00000566296 CD276Q5ZPR3 534 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 KDM4DQ6B0I6 523 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 SLC18B1Q6NT16 456 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 FIP1L1Q6UN15 594 aaKnown RBP13.75□□□□□ -0.21
TSR3-202ENST00000566296 LYPD2Q6UXB3 125 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 ZNF620Q6ZNG0 422 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 CFAP77Q6ZQR2 320 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 ZBTB49Q6ZSB9 765 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 TMEM86BQ8N661 226 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 SLC26A10Q8NG04 563 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 PCGF1Q9BSM1 259 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 SLC22A4Q9H015 551 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 OR52D1Q9H346 318 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 PRDM13Q9H4Q3 707 aa13.75□□□□□ -0.21
TSR3-202ENST00000566296 FN3KRPQ9HA64 309 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms