RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 FAM230AA0A1W2PPH8 454 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 A0A1W2PPV4 95 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 MAP1LC3B2A6NCE7 125 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ZNF705FA8MVS1 300 aaPredicted RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 J3QRE1 110 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 M0R296 226 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 LAMTOR5O43504 91 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 HCRTR1O43613 425 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 FGF17O60258 216 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 LRP3O75074 770 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 CNMDO75829 334 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 C1QL1O75973 258 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 NDUFB8O95169 186 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SEMA4FO95754 770 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 TSPAN13O95857 204 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 EFEMP2O95967 443 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 CSTBP04080 98 aaKnown RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 REG1AP05451 166 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 POU2F2P09086 479 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 CXCL1P09341 107 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 C1QTNF9P0C862 333 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ZNF705DP0CH99 300 aaPredicted RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ZNF705BP0CI00 300 aaPredicted RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 PF4V1P10720 104 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 GOT1P17174 413 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 NDUFV2P19404 249 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 GZMHP20718 246 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 S100GP29377 79 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 GABRA3P34903 492 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 VIPR2P41587 438 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 EFNA5P52803 228 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 CRYBA4P53673 196 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ATP1B3P54709 279 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 PCBP3P57721 371 aaKnown RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 TAS2R20P59543 309 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 IL2P60568 153 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SNRPD1P62314 119 aaKnown RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 HLA-DRB3P79483 266 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ST3GAL3Q11203 375 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 DHRS2Q13268 280 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ENDOGQ14249 297 aaKnown RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ACKR1Q16570 336 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 CDO1Q16878 200 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 C2orf68Q2NKX9 166 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ACSM3Q53FZ2 586 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 PDZD11Q5EBL8 140 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 CTSL3PQ5NE16 218 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 DMKNQ6E0U4 476 aaPredicted RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 REEP3Q6NUK4 255 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 MRPL54Q6P161 138 aaKnown RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 TTLL10Q6ZVT0 673 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 RPS27LQ71UM5 84 aaKnown RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 GLT6D1Q7Z4J2 308 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 C17orf64Q86WR6 236 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 TMEM173Q86WV6 379 aaPredicted RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 GKN2Q86XP6 184 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 APOBEC3FQ8IUX4 373 aaKnown RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SLC39A11Q8N1S5 342 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SYS1Q8N2H4 156 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SLC16A11Q8NCK7 471 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 OR4D9Q8NGE8 314 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 OR52B4Q8NGK2 314 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 OR4X1Q8NH49 305 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 LGALS14Q8TCE9 139 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 FAM3CQ92520 227 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 PSMF1Q92530 271 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SPSB4Q96A44 273 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SEH1LQ96EE3 360 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 MRAP2Q96G30 205 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 FAM46AQ96IP4 442 aaKnown RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 PRRC1Q96M27 445 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SLC46A1Q96NT5 459 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SIGLEC12Q96PQ1 595 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 HIST1H2AAQ96QV6 131 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 TBX15Q96SF7 602 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 GABRG3Q99928 467 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 MACROD1Q9BQ69 325 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 GINS3Q9BRX5 216 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ZNF649Q9BS31 505 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 MED10Q9BTT4 135 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 MAP1LC3BQ9GZQ8 125 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 KATNBL1Q9H079 304 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 RERGLQ9H628 205 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SIRT3Q9NTG7 399 aaPredicted RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SLC13A4Q9UKG4 626 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 PADI3Q9ULW8 664 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 SSUH2Q9Y2M2 353 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 HIF3AQ9Y2N7 669 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 CSAG2Q9Y5P2 127 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ZSWIM8A7E2V4 1837 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 BRCA1P38398 1863 aaKnown RBP5.64□□□□□ -1.51
PTPN9-204ENST00000564970 MIA3Q5JRA6 1907 aa5.64□□□□□ -1.51
PTPN9-204ENST00000564970 ANKRD12Q6UB98 2062 aa5.63□□□□□ -1.51
PTPN9-204ENST00000564970 LOC100289279A0A1B0GTE1 492 aa5.63□□□□□ -1.51
PTPN9-204ENST00000564970 SMIM30A4D0T7 59 aa5.63□□□□□ -1.51
PTPN9-204ENST00000564970 OR6C6A6NF89 314 aa5.63□□□□□ -1.51
PTPN9-204ENST00000564970 PGPEP1LA6NFU8 196 aa5.63□□□□□ -1.51
PTPN9-204ENST00000564970 C9JQL5 133 aa5.63□□□□□ -1.51
PTPN9-204ENST00000564970 SMIM22K7EJ46 135 aa5.63□□□□□ -1.51
PTPN9-204ENST00000564970 RNASET2O00584 256 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms