RNA–Protein interactions for RNA: ENST00000564968.1

CLCN7-208, Transcript of chloride voltage-gated channel 7, human

TSL 4

Gene CLCN7, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN7-208	ENST00000564968	SDR9C7	Q8NEX9	313 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	OR4K13	Q8NH42	304 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	RCN3	Q96D15	328 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	NMNAT3	Q96T66	252 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	SIKE1	Q9BRV8	207 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	PPA2	Q9H2U2	334 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	TOR3A	Q9H497	397 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	C16orf95	Q9H693	158 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	CMTM6	Q9NX76	183 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	ZNF281	Q9Y2X9	895 aa		13.1	□□□□□ -0.31
CLCN7-208	ENST00000564968	TRBV4-1	A0A0J9YWV2	114 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968		A0A1B0GVI7	797 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	C5orf63	A6NC05	138 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	PTP4A3	O75365	173 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	PAH	P00439	452 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	OMP	P47874	163 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	LIPE	Q05469	1076 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	ECH1	Q13011	328 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	KRTAP27-1	Q3LI81	207 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	FBLN7	Q53RD9	439 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	GLYATL3	Q5SZD4	288 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	SMARCD3	Q6STE5	483 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	CBLL1	Q75N03	491 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	OR6V1	Q8N148	313 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	PNKD	Q8N490	385 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	FAM216B	Q8N7L0	139 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	OR56B2P	Q8NGI1	322 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	FAM162A	Q96A26	154 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	CCL13	Q99616	98 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	SLC22A4	Q9H015	551 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	ANKRD19P	Q9H560	264 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	CNTD2	Q9H8S5	307 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	PNRC2	Q9NPJ4	139 aa	Known RBP	13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	ADA2	Q9NZK5	511 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	CAB39	Q9Y376	341 aa	Predicted RBP	13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	KPTN	Q9Y664	436 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	ENPP4	Q9Y6X5	453 aa		13.09	□□□□□ -0.31
CLCN7-208	ENST00000564968	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	NDUFA2	O43678	99 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	GMDS	O60547	372 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	DIRAS1	O95057	198 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	TXNDC12	O95881	172 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	ECD	O95905	644 aa	Predicted RBP	13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	NCK1	P16333	377 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	EEF1B2	P24534	225 aa	Known RBP	13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	GMFB	P60983	142 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	IKZF1	Q13422	519 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	SEC23B	Q15437	767 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	PCK2	Q16822	640 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	RFX4	Q33E94	735 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	SLC36A3	Q495N2	470 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968		Q6ZPA2	131 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968		Q6ZTK2	550 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	OR52J3	Q8NH60	311 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	LRRC29	Q8WV35	223 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	SPTSSA	Q969W0	71 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	SAR1A	Q9NR31	198 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	CYB5R1	Q9UHQ9	305 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	SIGLEC9	Q9Y336	463 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	CAPN7	Q9Y6W3	813 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	DNAH3	Q8TD57	4116 aa		13.08	□□□□□ -0.32
CLCN7-208	ENST00000564968	BHLHE40	O14503	412 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	NPFF	O15130	113 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	SLC2A1	P11166	492 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	HIST1H1C	P16403	213 aa	Known RBP	13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	NOS3	P29474	1203 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	GABRA5	P31644	462 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	SLC7A2	P52569	658 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	CBX1	P83916	185 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	WDR38	Q5JTN6	314 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	C1orf122	Q6ZSJ8	110 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	TSEN54	Q7Z6J9	526 aa	Known RBP	13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	CMTM4	Q8IZR5	234 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	H1FX	Q92522	213 aa	Known RBP	13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	SEH1L	Q96EE3	360 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	MAP6	Q96JE9	813 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	IFT27	Q9BW83	186 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	OR52D1	Q9H346	318 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	FAM53C	Q9NYF3	392 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	MRPL15	Q9P015	296 aa	Known RBP	13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	FOXJ3	Q9UPW0	622 aa		13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	FAM32A	Q9Y421	112 aa	Known RBP	13.07	□□□□□ -0.32
CLCN7-208	ENST00000564968	NOTCH3	Q9UM47	2321 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968		A0A1W2PRQ8	180 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	MEIOC	A2RUB1	952 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	RNASEK-C17orf49	H0YIS7	233 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	NME4	O00746	187 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	TSPAN9	O75954	239 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	PTBP3	O95758	552 aa	Known RBP	13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	SELL	P14151	372 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	SLC6A6	P31641	620 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	PYCR1	P32322	319 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	SAA4	P35542	130 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	TGFBR2	P37173	567 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	CSNK2B	P67870	215 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	DGCR6	Q14129	220 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	HERPUD1	Q15011	391 aa		13.06	□□□□□ -0.32
CLCN7-208	ENST00000564968	LY6E	Q16553	131 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms