RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 PGAP1Q75T13 922 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 ZNF101Q8IZC7 436 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 RDH10Q8IZV5 341 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 PAQR4Q8N4S7 273 aaPredicted RBP11.08□□□□□ -0.64
CLK3-214ENST00000564096 SEMA6DQ8NFY4 1073 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 SPSB4Q96A44 273 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 C12orf43Q96C57 262 aaKnown RBP11.08□□□□□ -0.64
CLK3-214ENST00000564096 DACH2Q96NX9 599 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 CENPOQ9BU64 300 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 TCF7L1Q9HCS4 588 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 NCOA6Q14686 2063 aaPredicted RBP11.07□□□□□ -0.64
CLK3-214ENST00000564096 hCG_38984A0A1B0GV85 526 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 PDCD5O14737 125 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 CASKO14936 926 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 THBDP07204 575 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 OCMP0CE72 109 aaPredicted RBP11.07□□□□□ -0.64
CLK3-214ENST00000564096 FAM157BP0CG42 384 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 THBS4P35443 961 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 GNALP38405 381 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 MAP2K3P46734 347 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 SERPINB10P48595 397 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 MTNR1BP49286 362 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 UCP2P55851 309 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 VBP1P61758 197 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 NCS1P62166 190 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 RIPPLY1Q0D2K3 151 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 SNTB2Q13425 540 aaKnown RBP11.07□□□□□ -0.64
CLK3-214ENST00000564096 CDSNQ15517 529 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 BEX5Q5H9J7 111 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 ZBTB37Q5TC79 503 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 TMEM91Q6ZNR0 172 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 NAA40Q86UY6 237 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 PLPP7Q8NBV4 271 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 CSNK2A3Q8NEV1 391 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 OR51A4Q8NGJ6 313 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 OR1J1Q8NGS3 322 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 OR10AC1Q8NH08 325 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 OR2AE1Q8NHA4 323 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 PP6455Q8WZ26 134 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 PPP1R14AQ96A00 147 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 RADILQ96JH8 1075 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 WFIKKN1Q96NZ8 548 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 OR51B6Q9H340 312 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 NEK6Q9HC98 313 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 NOX4Q9NPH5 578 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 ZNF275Q9NSD4 429 aaPredicted RBP11.07□□□□□ -0.64
CLK3-214ENST00000564096 PTTG3PQ9NZH4 202 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 ZNF319Q9P2F9 582 aa11.07□□□□□ -0.64
CLK3-214ENST00000564096 ESPL1Q14674 2120 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 ZFYVE26Q68DK2 2539 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 KALRNO60229 2985 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 TRBV5-7A0A0A0MS05 114 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 A0A1B0GTI1 187 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 GGT3PA6NGU5 568 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 ATP6V1G2-DDX39BF2Z307 99 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 H3BSH0 61 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 ABCD4O14678 606 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 ERCC1P07992 297 aaPredicted RBP11.06□□□□□ -0.64
CLK3-214ENST00000564096 GCH1P30793 250 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 ZNF92Q03936 586 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 BSPH1Q075Z2 132 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 GK2Q14410 553 aaPredicted RBP11.06□□□□□ -0.64
CLK3-214ENST00000564096 OR8B8Q15620 311 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 FOXB2Q5VYV0 432 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 RGS7BPQ6MZT1 257 aaPredicted RBP11.06□□□□□ -0.64
CLK3-214ENST00000564096 FBXW12Q6X9E4 464 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 SERPINA12Q8IW75 414 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 NKAIN3Q8N8D7 197 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 NUP37Q8NFH4 326 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 SGK3Q96BR1 496 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 CPNE2Q96FN4 548 aaPredicted RBP11.06□□□□□ -0.64
CLK3-214ENST00000564096 TRMT61AQ96FX7 289 aaKnown RBP11.06□□□□□ -0.64
CLK3-214ENST00000564096 LYZL4Q96KX0 146 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 TECTBQ96PL2 329 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 DCSTAMPQ9H295 470 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 SNTG1Q9NSN8 517 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 POU2F3Q9UKI9 436 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 PIGLQ9Y2B2 252 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 V9GYS6 101 aa11.06□□□□□ -0.64
CLK3-214ENST00000564096 TRAV1-2A0A0B4J238 106 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 ZNF816-ZNF321PA0A0X1KG74 233 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 NGFP01138 241 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 IL1AP01583 271 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 CD3EP07766 207 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 RAC2P15153 192 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 GRNP28799 593 aaKnown RBP11.05□□□□□ -0.64
CLK3-214ENST00000564096 CALCRP30988 508 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 SOX6P35712 828 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 DDOSTP39656 456 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 KIR2DL3P43628 341 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 GSK3AP49840 483 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 SELENOVP59797 346 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 FAM3AP98173 230 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 INSL4Q14641 139 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 CNN3Q15417 329 aaKnown RBP11.05□□□□□ -0.64
CLK3-214ENST00000564096 SPATA46Q5T0L3 261 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 SLC22A25Q6T423 547 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 UNQ9370/PRO34162Q6UXP9 181 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 Q6ZSR3 168 aa11.05□□□□□ -0.64
CLK3-214ENST00000564096 TPRA1Q86W33 373 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms