RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CNTD2Q9H8S5 307 aa17.3■□□□□ 0.36
HERC2-204ENST00000563945 MRPL15Q9P015 296 aaKnown RBP17.3■□□□□ 0.36
HERC2-204ENST00000563945 N6AMT1Q9Y5N5 214 aa17.3■□□□□ 0.36
HERC2-204ENST00000563945 BTBD17A6NE02 478 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 DVL1O14640 695 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 IGHV4-59P01825 116 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 GRK5P34947 590 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 HOXA4Q00056 320 aaPredicted RBP17.29■□□□□ 0.36
HERC2-204ENST00000563945 SPIBQ01892 262 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 ZNF92Q03936 586 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 DRAM2Q6UX65 266 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 HACD2Q6Y1H2 254 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 LNX2Q8N448 690 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 OR2AE1Q8NHA4 323 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 LINC01006Q8NI28 216 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 ST8SIA4Q92187 359 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 MCUR1Q96AQ8 359 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 C7orf34Q96L11 122 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 PKP2Q99959 881 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 FN3KQ9H479 309 aa17.29■□□□□ 0.36
HERC2-204ENST00000563945 DCAF13Q9NV06 445 aaKnown RBP17.29■□□□□ 0.36
HERC2-204ENST00000563945 OR6C68A6NDL8 312 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 BHLHE40O14503 412 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 PSME3P61289 254 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 SLC35F1Q5T1Q4 408 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 PDZD9Q8IXQ8 264 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 PROKR2Q8NFJ6 384 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 OR8S1Q8NH09 359 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 DHRS1Q96LJ7 313 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 COPS4Q9BT78 406 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 SIRPDQ9H106 197 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 SMURF1Q9HCE7 757 aa17.28■□□□□ 0.36
HERC2-204ENST00000563945 PNRC2Q9NPJ4 139 aaKnown RBP17.28■□□□□ 0.36
HERC2-204ENST00000563945 A0A0U1RQK1 487 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 ANKRD30BLA7E2S9 258 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 PTBP3O95758 552 aaKnown RBP17.27■□□□□ 0.36
HERC2-204ENST00000563945 IER3P46695 156 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.27■□□□□ 0.36
HERC2-204ENST00000563945 DBPQ10586 325 aaPredicted RBP17.27■□□□□ 0.36
HERC2-204ENST00000563945 SNAI3Q3KNW1 292 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 ASPHD2Q6ICH7 369 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 C8orf82Q6P1X6 216 aaPredicted RBP17.27■□□□□ 0.36
HERC2-204ENST00000563945 ZNF826PQ6ZT77 177 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 RHOUQ7L0Q8 258 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 CMTM4Q8IZR5 234 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 GNPDA2Q8TDQ7 276 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 MAP6Q96JE9 813 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 OPA3Q9H6K4 179 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 CENPMQ9NSP4 180 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 MRPL22Q9NWU5 206 aaKnown RBP17.27■□□□□ 0.36
HERC2-204ENST00000563945 ADA2Q9NZK5 511 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 V9GYQ6 96 aa17.27■□□□□ 0.36
HERC2-204ENST00000563945 SLC22A31A6NKX4 558 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 CLPXO76031 633 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 EEF1B2P24534 225 aaKnown RBP17.26■□□□□ 0.35
HERC2-204ENST00000563945 PYCR1P32322 319 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 DDOSTP39656 456 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 PRKXP51817 358 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 POU4F2Q12837 409 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 MICBQ29980 383 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 CDONQ4KMG0 1287 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 GLYATL3Q5SZD4 288 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 LDLRAD3Q86YD5 345 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 FAM90A1Q86YD7 464 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 GCSAMQ8N6F7 178 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 OR52L1Q8NGH7 329 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 OR2T4Q8NH00 348 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 PYURFQ96I23 114 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 ONECUT1Q9UBC0 465 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 KPTNQ9Y664 436 aa17.26■□□□□ 0.35
HERC2-204ENST00000563945 IGHV3OR15-7A0A075B7D8 119 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 A0A1B0GVI7 797 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 TVP23AA6NH52 213 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 FBP1P09467 338 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 KRTAP10-3P60369 221 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 DHRS7BQ6IAN0 325 aaPredicted RBP17.25■□□□□ 0.35
HERC2-204ENST00000563945 VMO1Q7Z5L0 202 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 OR56B2PQ8NGI1 322 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 NPRL2Q8WTW4 380 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 CMTM5Q96DZ9 223 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 FUZQ9BT04 418 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 SPAG4Q9NPE6 437 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 ABCD2Q9UBJ2 740 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 KAAG1Q9UBP8 84 aa17.25■□□□□ 0.35
HERC2-204ENST00000563945 RPUSD1Q9UJJ7 312 aaKnown RBP17.25■□□□□ 0.35
HERC2-204ENST00000563945 TBX1O43435 398 aa17.24■□□□□ 0.35
HERC2-204ENST00000563945 XRCC2O43543 280 aa17.24■□□□□ 0.35
HERC2-204ENST00000563945 NAA10P41227 235 aaPredicted RBP17.24■□□□□ 0.35
HERC2-204ENST00000563945 RPS27P42677 84 aaKnown RBP17.24■□□□□ 0.35
HERC2-204ENST00000563945 PROK1P58294 105 aa17.24■□□□□ 0.35
HERC2-204ENST00000563945 SLC36A1Q7Z2H8 476 aa17.24■□□□□ 0.35
HERC2-204ENST00000563945 DPY19L4Q7Z388 723 aa17.24■□□□□ 0.35
HERC2-204ENST00000563945 DCXRQ7Z4W1 244 aa17.24■□□□□ 0.35
HERC2-204ENST00000563945 FAM86B1Q8N7N1 296 aa17.24■□□□□ 0.35
HERC2-204ENST00000563945 ZSCAN4Q8NAM6 433 aaPredicted RBP17.24■□□□□ 0.35
HERC2-204ENST00000563945 FAM110DQ8TAY7 271 aaPredicted RBP17.24■□□□□ 0.35
HERC2-204ENST00000563945 RNPEPL1Q9HAU8 725 aa17.24■□□□□ 0.35
HERC2-204ENST00000563945 NDUFB3O43676 98 aa17.23■□□□□ 0.35
HERC2-204ENST00000563945 SPARCP09486 303 aa17.23■□□□□ 0.35
HERC2-204ENST00000563945 MUC1P15941 1255 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms