RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 OR2AT4A6NND4 320 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 MPIG6BO95866 241 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 IL2RAP01589 272 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 CHRM2P08172 466 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 FGF5P12034 268 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 ZNF17P17021 662 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 CCL1P22362 96 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 FKBP2P26885 142 aaKnown RBP17.66■□□□□ 0.42
MSLN-205ENST00000563941 TMPPEQ6ZT21 453 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 NAT6Q93015 286 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 WDR54Q9H977 334 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 PFDN2Q9UHV9 154 aa17.66■□□□□ 0.42
MSLN-205ENST00000563941 TLX3O43711 291 aaPredicted RBP17.65■□□□□ 0.42
MSLN-205ENST00000563941 HCKP08631 526 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 TBPP20226 339 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 ZP3P21754 424 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 GRB2P62993 217 aaKnown RBP17.65■□□□□ 0.42
MSLN-205ENST00000563941 DOK3Q7L591 496 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 OR5M9Q8NGP3 310 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 ST8SIA4Q92187 359 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 GPN3Q9UHW5 284 aaPredicted RBP17.65■□□□□ 0.42
MSLN-205ENST00000563941 NXT1Q9UKK6 140 aaKnown RBP17.65■□□□□ 0.42
MSLN-205ENST00000563941 SESN1Q9Y6P5 492 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 LOC102723996A0A087X1L8 192 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 CDC14BO60729 498 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 PMP2P02689 132 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 IFNA6P05013 189 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 IL13RA1P78552 427 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 GTPBP8Q8N3Z3 284 aaPredicted RBP17.65■□□□□ 0.42
MSLN-205ENST00000563941 OR2I1PQ8NGU4 316 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 IFI44Q8TCB0 444 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 MITD1Q8WV92 249 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 SEC22AQ96IW7 307 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 DMRTA2Q96SC8 542 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 ZNF416Q9BWM5 594 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 COMMD9Q9P000 198 aa17.65■□□□□ 0.42
MSLN-205ENST00000563941 COLQQ9Y215 455 aaPredicted RBP17.65■□□□□ 0.42
MSLN-205ENST00000563941 A0A0D9SG52 128 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 RLN2P04090 185 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 MGMTP16455 207 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 SGCAQ16586 387 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 LRRC37A5PQ49AS3 106 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 PLAC9Q5JTB6 97 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 C11orf87Q6NUJ2 197 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 SLC38A6Q8IZM9 456 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 ADAD2Q8NCV1 583 aaKnown RBP17.64■□□□□ 0.41
MSLN-205ENST00000563941 KCNG3Q8TAE7 436 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 TMEM41AQ96HV5 264 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 LINC00052Q96N35 136 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 BANF2Q9H503 90 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 PILRBQ9UKJ0 227 aa17.64■□□□□ 0.41
MSLN-205ENST00000563941 TNRC6BQ9UPQ9 1833 aaKnown RBP17.64■□□□□ 0.41
MSLN-205ENST00000563941 IGHV1-45A0A0A0MS14 117 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 SOCS1O15524 211 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 UBBP0CG47 229 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 SLC25A4P12235 298 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 HLA-GP17693 338 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 RPS27AP62979 156 aaKnown RBP17.63■□□□□ 0.41
MSLN-205ENST00000563941 UBA52P62987 128 aaKnown RBP17.63■□□□□ 0.41
MSLN-205ENST00000563941 PMS2CLQ68D20 193 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 FAHD2BQ6P2I3 314 aaPredicted RBP17.63■□□□□ 0.41
MSLN-205ENST00000563941 PDZD9Q8IXQ8 264 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 OR4K15Q8NH41 348 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 OR1S1Q8NH92 325 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 RAB3CQ96E17 227 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 FAHD2AQ96GK7 314 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 PHB2Q99623 299 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 CDX2Q99626 313 aaPredicted RBP17.63■□□□□ 0.41
MSLN-205ENST00000563941 TMEM59Q9BXS4 323 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 FN3KRPQ9HA64 309 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 TNFSF18Q9UNG2 199 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 SPEF1Q9Y4P9 236 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 A0A087WZY1 265 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 GSTP1P09211 210 aaKnown RBP17.63■□□□□ 0.41
MSLN-205ENST00000563941 HIST1H1DP16402 221 aaKnown RBP17.63■□□□□ 0.41
MSLN-205ENST00000563941 IL11RAQ14626 422 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 KCNRGQ8N5I3 272 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 GALNT11Q8NCW6 608 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 PPP1R1CQ8WVI7 109 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 GPER1Q99527 375 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 COQ3Q9NZJ6 369 aa17.63■□□□□ 0.41
MSLN-205ENST00000563941 A0A1W2PP11 408 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 E9PLN8 166 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 UMODP07911 640 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 NR2C1P13056 603 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 AKR1C4P17516 323 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 VAMP1P23763 118 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 CSNK1A1P48729 337 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 LSM6P62312 80 aaKnown RBP17.62■□□□□ 0.41
MSLN-205ENST00000563941 H3F3AP84243 136 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 OPN5Q6U736 354 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.62■□□□□ 0.41
MSLN-205ENST00000563941 OR14K1Q8NGZ2 314 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 CASTOR1Q8WTX7 329 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 ST8SIA2Q92186 375 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 GAREM1Q9H706 876 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 ANAPC10Q9UM13 185 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 IGKV1-9A0A0C4DH69 117 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 C5orf63A6NC05 138 aa17.62■□□□□ 0.41
MSLN-205ENST00000563941 FAM25EA8MYX2 175 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms