RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ITGA3P26006 1051 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 CD80P33681 288 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 BLKP51451 505 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 ZNF260Q3ZCT1 412 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 BHLHE23Q8NDY6 225 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 PHYHIPLQ96FC7 376 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 RANBP2P49792 3224 aaKnown RBP10.54□□□□□ -0.72
ABCA3-203ENST00000563623 PLPP3O14495 311 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 ZNF354AO60765 605 aaPredicted RBP10.54□□□□□ -0.72
ABCA3-203ENST00000563623 MT-ATP6P00846 226 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 SPP1P10451 314 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 CYCSP99999 105 aaKnown RBP10.54□□□□□ -0.72
ABCA3-203ENST00000563623 FZD2Q14332 565 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 TEX30Q5JUR7 227 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 AVPI1Q5T686 147 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 PTCRAQ6ISU1 281 aaPredicted RBP10.54□□□□□ -0.72
ABCA3-203ENST00000563623 NKAIN3Q8N8D7 197 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 SLAMF6Q96DU3 332 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 FBXO17Q96EF6 278 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 S100A13Q99584 98 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 CDC6Q99741 560 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 ADAM19Q9H013 955 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 SLCO1B1Q9Y6L6 691 aa10.54□□□□□ -0.72
ABCA3-203ENST00000563623 MSGN1A6NI15 193 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 RHPN2P1A8MT19 583 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 M0R036 132 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 SOCS1O15524 211 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 OR2T1O43869 369 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 EIF1BO60739 113 aaKnown RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 LRP3O75074 770 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 GABRG2P18507 467 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 EIF1P41567 113 aaKnown RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 RAB5BP61020 215 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 PEA15Q15121 130 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 FAM166AQ6J272 317 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 PEG10Q86TG7 708 aaKnown RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 ZNF283Q8N7M2 679 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 OR51F2Q8NH61 342 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 LIPHQ8WWY8 451 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 BARX1Q9HBU1 254 aaPredicted RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 CBY1Q9Y3M2 126 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 LSM5Q9Y4Y9 91 aaKnown RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 CLDN16Q9Y5I7 305 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 PHF3Q92576 2039 aaKnown RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 FRG2CA6NGY1 282 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 DUS4LO95620 317 aaKnown RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 CD74P04233 296 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 CRYBA1P05813 215 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 PPT1P50897 306 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 FNDC7Q5VTL7 733 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 UQCC3Q6UW78 93 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 ZDHHC22Q8N966 263 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 DAZLQ92904 295 aaKnown RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 RRNAD1Q96FB5 475 aaKnown RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 FAM117AQ9C073 453 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 FBRSQ9HAH7 460 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 RPS10P5Q9NQ39 176 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 EHFQ9NZC4 300 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 OR5AC2Q9NZP5 309 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 TEX13DA0A0J9YY54 714 aaPredicted RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 SPTY2D1-AS1A0A0U1RR47 76 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 KLK3P07288 261 aaPredicted RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 GLI4P10075 376 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 SLC6A9P48067 706 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 DHPSP49366 369 aaPredicted RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 ROM1Q03395 351 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 UNC119Q13432 240 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 RAB32Q13637 225 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 FDX2Q6P4F2 183 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 RNF144BQ7Z419 303 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 ZSCAN4Q8NAM6 433 aaPredicted RBP10.53□□□□□ -0.72
ABCA3-203ENST00000563623 TERB2Q8NHR7 220 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 C11orf40Q8WZ69 217 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 CYYR1Q96J86 154 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 PBOV1Q9GZY1 135 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 RHOFQ9HBH0 211 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 UQCC1Q9NVA1 299 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 DZANK1Q9NVP4 752 aa10.53□□□□□ -0.72
ABCA3-203ENST00000563623 IGKV1D-43A0A0B4J1Z2 117 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 NUDT21O43809 227 aaKnown RBP10.52□□□□□ -0.72
ABCA3-203ENST00000563623 ACAA1P09110 424 aaPredicted RBP10.52□□□□□ -0.72
ABCA3-203ENST00000563623 ABCD3P28288 659 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 CDAP32320 146 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 TAS2R31P59538 309 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 MICBQ29980 383 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 KRBOX4Q5JUW0 171 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 GRINAQ7Z429 371 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 TMEM104Q8NE00 496 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 OR51T1Q8NGJ9 327 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 PHOSPHO2Q8TCD6 241 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 NECAB3Q96P71 396 aaPredicted RBP10.52□□□□□ -0.72
ABCA3-203ENST00000563623 C20orf24Q9BUV8 137 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 LRRC61Q9BV99 259 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 TMEM59Q9BXS4 323 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 ZFP57Q9NU63 452 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 RHBDD3Q9Y3P4 386 aa10.52□□□□□ -0.72
ABCA3-203ENST00000563623 C1orf196B1AJZ1 125 aa10.52□□□□□ -0.73
ABCA3-203ENST00000563623 C5orf67F2Z3F1 127 aa10.52□□□□□ -0.73
ABCA3-203ENST00000563623 ADCYAP1P18509 176 aa10.52□□□□□ -0.73
ABCA3-203ENST00000563623 FBLP22087 321 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms