RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 EFNB1P98172 346 aa5.69□□□□□ -1.5
CLK3-212ENST00000563418 TMEM64Q6YI46 380 aa5.69□□□□□ -1.5
CLK3-212ENST00000563418 TMEM99Q8N816 258 aa5.69□□□□□ -1.5
CLK3-212ENST00000563418 PNPLA1Q8N8W4 532 aa5.69□□□□□ -1.5
CLK3-212ENST00000563418 THAP3Q8WTV1 239 aaPredicted RBP5.69□□□□□ -1.5
CLK3-212ENST00000563418 DGAT2Q96PD7 388 aa5.69□□□□□ -1.5
CLK3-212ENST00000563418 BCL2L10Q9HD36 194 aa5.69□□□□□ -1.5
CLK3-212ENST00000563418 OR6C3Q9NZP0 311 aa5.69□□□□□ -1.5
CLK3-212ENST00000563418 RNF24Q9Y225 148 aa5.69□□□□□ -1.5
CLK3-212ENST00000563418 SIPA1L1O43166 1804 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TRBV9A0A0B4J1U6 114 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TRAV39A0A0B4J263 110 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TRAPPC6AO75865 159 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 FUT1P19526 365 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 MVDP53602 400 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TMEM33P57088 247 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 MALLQ13021 153 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 CD200R1LQ6Q8B3 271 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 C19orf48Q6RUI8 117 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 DHRS13Q6UX07 377 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 NUS1Q96E22 293 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 PDCD1LG2Q9BQ51 273 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 COL25A1Q9BXS0 654 aaPredicted RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 CNTD2Q9H8S5 307 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 PGA3P0DJD8 388 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 OR8G3PP0DMU2 310 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TCN2P20062 427 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 PRRX1P54821 245 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 RAB38P57729 211 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 DMWDQ09019 674 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 IL22RA1Q8N6P7 574 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SMOQ99835 787 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 PPT2Q9UMR5 302 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 PSME4Q14997 1843 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 BLACEA4D250 179 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TAPBPO15533 448 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 WNT11O96014 354 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 GPR12P47775 334 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TCL1AP56279 114 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 IL10RAQ13651 578 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 HIKESHIQ53FT3 197 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 RPL7L1Q6DKI1 246 aaKnown RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 FAM129CQ86XR2 697 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 OR4N5Q8IXE1 308 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 HINT3Q9NQE9 182 aaKnown RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 HMGN2P05204 90 aaKnown RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 GYPBP06028 91 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 AGFG1P52594 562 aaKnown RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 OR8G2PQ6IF36 304 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 OVCA2Q8WZ82 227 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 NEIL2Q969S2 332 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SPTSSAQ969W0 71 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 NKX3-1Q99801 234 aaPredicted RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 SIGLEC1Q9BZZ2 1709 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 PMS2P1A4D2B8 440 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 MASP2O00187 686 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 GPM6BQ13491 265 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 LRRTM4Q86VH4 590 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TGIF2LYQ8IUE0 185 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 LPPQ93052 612 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 DERL3Q96Q80 235 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TMEM269A0A1B0GVZ9 245 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SLC5A10A0PJK1 596 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 CTXN2P0C2S0 81 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 ACVRL1P37023 503 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SLC36A2Q495M3 483 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TCTN3Q6NUS6 607 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 S100A7AQ86SG5 101 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 LAT2Q9GZY6 243 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 CLCF1Q9UBD9 225 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 COL22A1Q8NFW1 1626 aaPredicted RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 A0A1W2PNV4 684 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SERTM1A2A2V5 107 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 OR2M5A3KFT3 312 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 CLEC18AA5D8T8 446 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 DHRS7CA6NNS2 312 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 PDE6DO43924 150 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SCGB2A1O75556 95 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SYNGR4O95473 234 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SMIM10L2AP0DMW4 78 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SMIM10L2BP0DMW5 78 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 BTF3P20290 206 aaKnown RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 RPS18P62269 152 aaKnown RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 COX20Q5RI15 118 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 YOD1Q5VVQ6 348 aaPredicted RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 MRGPRGQ86SM5 289 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 H1FOOQ8IZA3 346 aaPredicted RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 CLEC18CQ8NCF0 446 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 MED20Q9H944 212 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SEBOXQ9HB31 216 aaPredicted RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 NAT8BQ9UHF3 227 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 MTCH2Q9Y6C9 303 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 CACNA1CQ13936 2221 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TNFSF15O95150 251 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 HIST1H1CP16403 213 aaKnown RBP5.68□□□□□ -1.5
CLK3-212ENST00000563418 ALOX5APP20292 161 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 ZNF385BQ569K4 471 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 WBP2NLQ6ICG8 309 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 USP50Q70EL3 339 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms