RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SPIN3Q5JUX0 258 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 C9orf135Q5VTT2 229 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 TMEM211Q6ICI0 200 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 ZNF529Q6P280 563 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 PAQR8Q8TEZ7 354 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 C11orf40Q8WZ69 217 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 GPX7Q96SL4 187 aaPredicted RBP6.76□□□□□ -1.33
TCF4-216ENST00000562680 THAP7Q9BT49 309 aaPredicted RBP6.76□□□□□ -1.33
TCF4-216ENST00000562680 GSN-AS1Q9NRJ2 163 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 DTX4Q9Y2E6 619 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 DMRT1Q9Y5R6 373 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 TMEM238LA0A1B0GVL6 79 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 AQP7P3A6NL99 342 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 EEF1E1-BLOC1S5C9J1V9 151 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 AIPO00170 330 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 NTN3O00634 580 aaPredicted RBP6.76□□□□□ -1.33
TCF4-216ENST00000562680 AMY2AP04746 511 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 PSMA6P60900 246 aaKnown RBP6.76□□□□□ -1.33
TCF4-216ENST00000562680 LSM6P62312 80 aaKnown RBP6.76□□□□□ -1.33
TCF4-216ENST00000562680 HNF4GQ14541 408 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 PCOLCEQ15113 449 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 SLC22A6Q4U2R8 563 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 RIPPLY2Q5TAB7 128 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 DGAT2L6Q6ZPD8 337 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 OR14K1Q8NGZ2 314 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 NPRL2Q8WTW4 380 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 PP6455Q8WZ26 134 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 TSPAN32Q96QS1 320 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 OBP2BQ9NPH6 170 aa6.76□□□□□ -1.33
TCF4-216ENST00000562680 MRPS18AQ9NVS2 196 aaKnown RBP6.76□□□□□ -1.33
TCF4-216ENST00000562680 LINC00862A6NCI5 91 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 CDC42EP2O14613 210 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 MED6O75586 246 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 TGM1P22735 817 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 ZFP36L1Q07352 338 aaKnown RBP6.75□□□□□ -1.33
TCF4-216ENST00000562680 CEACAM16Q2WEN9 425 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 CELF2-AS1Q8N7Q2 184 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 OR8D4Q8NGM9 314 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 DCLRE1CQ96SD1 692 aaKnown RBP6.75□□□□□ -1.33
TCF4-216ENST00000562680 ZCCHC4Q9H5U6 513 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 DYNLRB1Q9NP97 96 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 SMCO4Q9NRQ5 59 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 DNAJB11Q9UBS4 358 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 HPGDSO60760 199 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 STAG3L3P0CL85 134 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 CCL3P10147 92 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 SCAND1P57086 179 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 PRSS53Q2L4Q9 553 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 PCGF3Q3KNV8 242 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 THSD4Q6ZMP0 1018 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 FAM3DQ96BQ1 224 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 FGGYQ96C11 551 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 ADAM19Q9H013 955 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 PLSCR3Q9NRY6 295 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 A0A1W2PPQ1 181 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 M0R143 59 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 CTDSP2O14595 271 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 GCM2O75603 506 aaPredicted RBP6.75□□□□□ -1.33
TCF4-216ENST00000562680 GPX5O75715 221 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 AQP8O94778 261 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 IGKV1D-16P01601 117 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 SP1P08047 785 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 ACSM4P0C7M7 580 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 COX6A1P12074 109 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 PKIAP61925 76 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 C16orf47Q6ZP98 133 aaPredicted RBP6.75□□□□□ -1.33
TCF4-216ENST00000562680 VASH2Q86V25 355 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 OR2M7Q8NG81 312 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 LGALS14Q8TCE9 139 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 RNF128Q8TEB7 428 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 APOBEC3DQ96AK3 386 aaPredicted RBP6.75□□□□□ -1.33
TCF4-216ENST00000562680 C12orf49Q9H741 205 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 GSKIPQ9P0R6 139 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 FXYD6-FXYD2A0A087WZ82 144 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 TIMM8AO60220 97 aaPredicted RBP6.75□□□□□ -1.33
TCF4-216ENST00000562680 TXNDC12O95881 172 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 CRYAAP02489 173 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 RAD52P43351 418 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 LIMS1P48059 325 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 ZNF616Q08AN1 781 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 PLPPR5Q32ZL2 321 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 C1orf185Q5T7R7 199 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 B3GNTL1Q67FW5 361 aaPredicted RBP6.75□□□□□ -1.33
TCF4-216ENST00000562680 OR6V1Q8N148 313 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 PARP16Q8N5Y8 322 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 ASB10Q8WXI3 467 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 TSSK2Q96PF2 358 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 PDCD1LG2Q9BQ51 273 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 RTL8AQ9BWD3 113 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 FXYD6Q9H0Q3 95 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 MMP28Q9H239 520 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 PARD6AQ9NPB6 346 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 FOXJ3Q9UPW0 622 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 POLDIP2Q9Y2S7 368 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 MFSD2BA6NFX1 497 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 TBX6O95947 436 aaPredicted RBP6.75□□□□□ -1.33
TCF4-216ENST00000562680 FBP1P09467 338 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 THBS4P35443 961 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 IFITM2Q01629 132 aa6.75□□□□□ -1.33
TCF4-216ENST00000562680 ACSM1Q08AH1 577 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms