RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 C12orf10Q9HB07 376 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 MTFP1Q9UDX5 166 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 RCL1Q9Y2P8 373 aaKnown RBP3.88□□□□□ -1.79
SMG1-204ENST00000561940 ARFGEF1Q9Y6D6 1849 aa3.88□□□□□ -1.79
SMG1-204ENST00000561940 CABIN1Q9Y6J0 2220 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 LY75O60449 1722 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 IFT172Q9UG01 1749 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 A0A1B0GTQ1 180 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 CASC3O15234 703 aaKnown RBP3.87□□□□□ -1.79
SMG1-204ENST00000561940 SIVA1O15304 175 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 RP2O75695 350 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 FGFR1OPO95684 399 aaKnown RBP3.87□□□□□ -1.79
SMG1-204ENST00000561940 LSM8O95777 96 aaKnown RBP3.87□□□□□ -1.79
SMG1-204ENST00000561940 HBE1P02100 147 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 HLA-DPB1P04440 258 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 ATF6P18850 670 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
SMG1-204ENST00000561940 LRRC63Q05C16 580 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 TRMT5Q32P41 509 aaKnown RBP3.87□□□□□ -1.79
SMG1-204ENST00000561940 PIP5KL1Q5T9C9 394 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 MBOAT2Q6ZWT7 520 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 ARRDC1Q8N5I2 433 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 JAGN1Q8N5M9 183 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 NPWQ8N729 165 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 ABHD3Q8WU67 409 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 MRGPRFQ96AM1 343 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 ZNF707Q96C28 371 aaPredicted RBP3.87□□□□□ -1.79
SMG1-204ENST00000561940 TM4SF18Q96CE8 201 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 EDA2RQ9HAV5 297 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 RPRD1BQ9NQG5 326 aaKnown RBP3.87□□□□□ -1.79
SMG1-204ENST00000561940 PXMP2Q9NR77 195 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 OR12D3Q9UGF7 316 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 PSG11Q9UQ72 335 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 SBF1O95248 1867 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 PIK3C2AO00443 1686 aa3.87□□□□□ -1.79
SMG1-204ENST00000561940 TUBGCP6Q96RT7 1819 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 GABRPO00591 440 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 BCKDKO14874 412 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 SPAG7O75391 227 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 HLA-HP01893 362 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 RETP07949 1114 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 CD3GP09693 182 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 LONP1P36776 959 aaKnown RBP3.86□□□□□ -1.79
SMG1-204ENST00000561940 CLDN8P56748 225 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 PPP1CBP62140 327 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 SEMG2Q02383 582 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 CDH17Q12864 832 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 ZNF266Q14584 549 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 GABRA6Q16445 453 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 HIKESHIQ53FT3 197 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 THEM4Q5T1C6 240 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 TMEM205Q6UW68 189 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 MICU2Q8IYU8 434 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 C8orf31Q8N9H6 132 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 LRRC75AQ8NAA5 344 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 OR5W2Q8NH69 310 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 EXOSC8Q96B26 276 aaKnown RBP3.86□□□□□ -1.79
SMG1-204ENST00000561940 SEH1LQ96EE3 360 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 DYNLL2Q96FJ2 89 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 GALNT14Q96FL9 552 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 VCXQ9H320 206 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 RPP21Q9H633 154 aaKnown RBP3.86□□□□□ -1.79
SMG1-204ENST00000561940 C8orf33Q9H7E9 229 aaPredicted RBP3.86□□□□□ -1.79
SMG1-204ENST00000561940 USP54Q70EL1 1684 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 PCDH11XQ9BZA7 1347 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 USP42Q9H9J4 1324 aaKnown RBP3.86□□□□□ -1.79
SMG1-204ENST00000561940 TTC28Q96AY4 2481 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 KIAA1551Q9HCM1 1747 aa3.86□□□□□ -1.79
SMG1-204ENST00000561940 N4BP2Q86UW6 1770 aaPredicted RBP3.85□□□□□ -1.79
SMG1-204ENST00000561940 IGHV5-10-1A0A0J9YXX1 117 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 SCELO95171 688 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 RALBP11234 206 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 RFC3P40938 356 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 RAB7AP51149 207 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 SLAQ13239 276 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 FAM83EQ2M2I3 478 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 TPTE2P1Q5T6R2 138 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 PLCXD3Q63HM9 321 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 NPSR1Q6W5P4 371 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 OTUD6AQ7L8S5 288 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 MRPL55Q7Z7F7 128 aaKnown RBP3.85□□□□□ -1.79
SMG1-204ENST00000561940 METTL13Q8N6R0 699 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 C11orf72Q8NBR9 251 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 CHST4Q8NCG5 386 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 GPX8Q8TED1 209 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 GLYATL2Q8WU03 294 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 NTAN1Q96AB6 310 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 PDXPQ96GD0 296 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 FOXC2Q99958 501 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 IQCGQ9H095 443 aaKnown RBP3.85□□□□□ -1.79
SMG1-204ENST00000561940 PARP12Q9H0J9 701 aaKnown RBP3.85□□□□□ -1.79
SMG1-204ENST00000561940 PIGUQ9H490 435 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 WFDC1Q9HC57 220 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 CLN6Q9NWW5 311 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 TRMT112Q9UI30 125 aaKnown RBP3.85□□□□□ -1.79
SMG1-204ENST00000561940 RAB26Q9ULW5 256 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 RHBDD3Q9Y3P4 386 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 KIF1BO60333 1816 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 SCN4AP35499 1836 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 COL6A3P12111 3177 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms