RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 MYPOPQ86VE0 399 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 LACC1Q8IV20 430 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 APLFQ8IW19 511 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PRSS35Q8N3Z0 413 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 STPG2Q8N412 459 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 FGFRL1Q8N441 504 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 RIBC1Q8N443 379 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 NATD1Q8N6N6 113 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 TMEM99Q8N816 258 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 LRTM2Q8N967 370 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 OR52E5Q8NH55 327 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 NANPQ8TBE9 248 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 FAM110BQ8TC76 370 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 DYNC2LI1Q8TCX1 351 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 MYDGFQ969H8 173 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 NUS1Q96E22 293 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 IMP4Q96G21 291 aaKnown RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 QKIQ96PU8 341 aaKnown RBP eCLIP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 LYSMD1Q96S90 227 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 EBNA1BP2Q99848 306 aaKnown RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 NIPSNAP1Q9BPW8 284 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 APOOQ9BUR5 198 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 BARHL1Q9BZE3 327 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 METTL9Q9H1A3 318 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 WDR13Q9H1Z4 485 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 ANKRD19PQ9H560 264 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 FGF22Q9HCT0 170 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PHPT1Q9NRX4 125 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 RBM22Q9NW64 420 aaKnown RBP eCLIP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 BABAM2Q9NXR7 383 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 MIOXQ9UGB7 285 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 SMPXQ9UHP9 88 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 FBXL3Q9UKT7 428 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 NPIPA1Q9UND3 350 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 HEY1Q9Y5J3 304 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 TIMM10BQ9Y5J6 103 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PCYT1BQ9Y5K3 369 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PEX16Q9Y5Y5 336 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 ALG6Q9Y672 507 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 SELENOKQ9Y6D0 94 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CSNK1G3Q9Y6M4 447 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CDH10Q9Y6N8 788 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 DOCK9Q9BZ29 2069 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 DSPP15924 2871 aaKnown RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 SCN8AQ9UQD0 1980 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 DMXL2Q8TDJ6 3036 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CNOT1A5YKK6 2376 aaKnown RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 TRBV4-1A0A0J9YWV2 114 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 TRBV5-5A0A0J9YX44 114 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 ATP6AP2A0A1C7CYW4 349 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 A0A1W2PNU3 283 aaPredicted RBP3.42□□□□□ -1.86
LRRC28-222ENST00000561431 A0A1W2PPV9 198 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 PSMB11A5LHX3 300 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 A6NIZ1 184 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 LRRC30A6NM36 301 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 CENPXA8MT69 81 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 C9J4A7 227 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 G3V3Y1 287 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 H3BNH8 94 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 APOC4-APOC2K7ER74 178 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 CST8O60676 142 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 FCN3O75636 299 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 SC5DO75845 299 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 STK17BO94768 372 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 TSPAN13O95857 204 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 APOC2P02655 101 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 GAPDHP04406 335 aaKnown RBP3.42□□□□□ -1.86
LRRC28-222ENST00000561431 ALDOBP05062 364 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 GUSBP08236 651 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 CT62P0C5K7 136 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 NQO1P15559 274 aaKnown RBP3.42□□□□□ -1.86
LRRC28-222ENST00000561431 GNB3P16520 340 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 NPR2P20594 1047 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 TBXA2RP21731 343 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 AADACP22760 399 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 IVDP26440 423 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 CRABP1P29762 137 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 MAP3K8P41279 467 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 OMPP47874 163 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 GABRA4P48169 554 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 NPY2RP49146 381 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 PRLHRP49683 370 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 KPNA2P52292 529 aaKnown RBP3.42□□□□□ -1.86
LRRC28-222ENST00000561431 EFNB2P52799 333 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 PKNOX1P55347 436 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 RPL26P61254 145 aaKnown RBP3.42□□□□□ -1.86
LRRC28-222ENST00000561431 TNFRSF9Q07011 255 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 ITGA9Q13797 1035 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 SPA17Q15506 151 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 KCTD19Q17RG1 926 aaPredicted RBP3.42□□□□□ -1.86
LRRC28-222ENST00000561431 SLC22A6Q4U2R8 563 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 TFDP3Q5H9I0 405 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 CCNJQ5T5M9 372 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 HENMT1Q5T8I9 393 aaKnown RBP3.42□□□□□ -1.86
LRRC28-222ENST00000561431 DDI2Q5TDH0 399 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 HACD4Q5VWC8 232 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 LYPLAL1Q5VWZ2 237 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 FRMPD2BQ6IN97 320 aa3.42□□□□□ -1.86
LRRC28-222ENST00000561431 DNM1P34Q6PK57 102 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms