RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	COMMD3	Q9UBI1	195 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	UPB1	Q9UBR1	384 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	DAPK2	Q9UIK4	370 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	AK6	Q9Y3D8	172 aa	Known RBP	6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	TIMM10B	Q9Y5J6	103 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395		V9GYH0	126 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	COL6A5	A8TX70	2615 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395		A0A1B0GTI1	187 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	AHRR	A9YTQ3	701 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395		M0R135	149 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	AIP	O00170	330 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	HPGDS	O60760	199 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC19A2	O60779	497 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	TMEM127	O75204	238 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	FARS2	O95363	451 aa	Known RBP	6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	IGLV3-1	P01715	115 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	APOC1	P02654	83 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	ANXA2	P07355	339 aa	Known RBP	6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	MMP7	P09237	267 aa	Predicted RBP	6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC2A1	P11166	492 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC2A2	P11168	524 aa	Predicted RBP	6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	IGFBP3	P17936	291 aa	Predicted RBP	6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	CCL1	P22362	96 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	CRYGS	P22914	178 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	ANOS1	P23352	680 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	MPG	P29372	298 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	PPP5C	P53041	499 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	FOXG1	P55316	489 aa	Predicted RBP	6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	ADORA2A-AS1	P86434	159 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	FAP	Q12884	760 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	RSPO1	Q2MKA7	263 aa	Predicted RBP	6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	FBXW9	Q5XUX1	488 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	NSUN5P2	Q63ZY6	315 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF324B	Q6AW86	544 aa	Predicted RBP	6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	ASPHD2	Q6ICH7	369 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	OR2A2	Q6IF42	318 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	TFAP2E	Q6VUC0	442 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	STAC2	Q6ZMT1	411 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	FAM57B	Q71RH2	274 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	FAM214B	Q7L5A3	538 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	PRSS45	Q7RTY3	260 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	UBE2J2	Q8N2K1	259 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	C9orf106	Q8NAJ2	232 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	OR1F12	Q8NHA8	337 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	FGFBP3	Q8TAT2	258 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	TRMT10A	Q8TBZ6	339 aa	Known RBP	6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	OR51E1	Q8TCB6	317 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF799	Q96GE5	643 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	PGAM5	Q96HS1	289 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	MDFI	Q99750	246 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	OR2H1	Q9GZK4	316 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	C12orf49	Q9H741	205 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC17A5	Q9NRA2	495 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	TAS2R4	Q9NYW5	299 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF224	Q9NZL3	707 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	CKLF	Q9UBR5	152 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	PRSS50	Q9UI38	385 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	ATPIF1	Q9UII2	106 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	SH3BGRL2	Q9UJC5	107 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	ADAM30	Q9UKF2	790 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395	VPS13C	Q709C8	3753 aa		6.55	□□□□□ -1.36
TPM1-231	ENST00000561395		A0A0U1RQV5	110 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395		A0A1B0GVI7	797 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	ANXA2P2	A6NMY6	339 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	IFITM5	A6NNB3	132 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395		E9PLN8	166 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395		F5H5K5	113 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395		J3QL48	77 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	SYT7	O43581	403 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	LMX1B	O60663	402 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	UPK1B	O75841	260 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	IL18BP	O95998	194 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	ITGA5	P08648	1049 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	DBH	P09172	617 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	PATE4	P0C8F1	98 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	SNRPB	P14678	240 aa	Known RBP	6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	CFP	P27918	469 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	CA7	P43166	264 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	HTR5A	P47898	357 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC6A9	P48067	706 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	PSMD7	P51665	324 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	TPTE	P56180	551 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	PSG4	Q00888	419 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	GALK2	Q01415	458 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	SF3B4	Q15427	424 aa	Known RBP eCLIP	6.54	□□□□□ -1.36	1e-9	■■□□□ 12.9
TPM1-231	ENST00000561395	CDSN	Q15517	529 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC36A2	Q495M3	483 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	KRTCAP3	Q53RY4	240 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	SFRP5	Q5T4F7	317 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	C9orf135	Q5VTT2	229 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF585A	Q6P3V2	769 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	ANKRD16	Q6P6B7	361 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	CNIH2	Q6PI25	160 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	DRAM2	Q6UX65	266 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	DOK3	Q7L591	496 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	LUZP2	Q86TE4	346 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	LRRC28	Q86X40	367 aa	Predicted RBP	6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	GCNT2	Q8N0V5	402 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF433	Q8N7K0	673 aa	Predicted RBP	6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	OR1K1	Q8NGR3	316 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms