RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	FABP3	P05413	133 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	CRYBA1	P05813	215 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	RRM2	P31350	389 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	PYCR1	P32322	319 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	MSX2	P35548	267 aa	Predicted RBP	11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	SPIB	Q01892	262 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	SRSF4	Q08170	494 aa	Known RBP	11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	PDCD1	Q15116	288 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	GLYATL3	Q5SZD4	288 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	TEX36	Q5VZQ5	186 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	OLFML2A	Q68BL7	652 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	RPL13AP3	Q6NVV1	102 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	OR2T4	Q8NH00	348 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	OR2AE1	Q8NHA4	323 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	SPSB4	Q96A44	273 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	MCUR1	Q96AQ8	359 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	DMRTB1	Q96MA1	342 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	KCNJ15	Q99712	375 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	CITED1	Q99966	193 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	ELAC2	Q9BQ52	826 aa	Known RBP	11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	TRIM15	Q9C019	465 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	NSRP1	Q9H0G5	558 aa	Known RBP	11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	MARCH7	Q9H992	704 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	SMURF1	Q9HCE7	757 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	ACOXL	Q9NUZ1	547 aa		11.29	□□□□□ -0.6
RNF31-223	ENST00000560754	GGT3P	A6NGU5	568 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	TVP23A	A6NH52	213 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	C3orf80	F5H4A9	247 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	ADAM20	O43506	726 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	PSKH1	P11801	424 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	DDOST	P39656	456 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	RPS27	P42677	84 aa	Known RBP	11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	RAG2	P55895	527 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	OR8B8	Q15620	311 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	RUSC1-AS1	Q66K80	236 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	ZNF826P	Q6ZT77	177 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	RHOU	Q7L0Q8	258 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	FAM90A1	Q86YD7	464 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	LNX2	Q8N448	690 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	LINC00471	Q8N535	108 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	CYB561A3	Q8NBI2	242 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	TBC1D15	Q8TC07	691 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	SSMEM1	Q8WWF3	244 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	GATAD2B	Q8WXI9	593 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	DYRK2	Q92630	601 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	TECTB	Q96PL2	329 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	ADAT1	Q9BUB4	502 aa	Known RBP	11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	NMNAT2	Q9BZQ4	307 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	EGLN3	Q9H6Z9	239 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	CNTD2	Q9H8S5	307 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	RNPEPL1	Q9HAU8	725 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	MED4	Q9NPJ6	270 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	C1orf123	Q9NWV4	160 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	KIF17	Q9P2E2	1029 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	CDH10	Q9Y6N8	788 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754		V9GYQ6	96 aa		11.28	□□□□□ -0.6
RNF31-223	ENST00000560754	IGHV1-69D	A0A0B4J2H0	117 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	ZNF593	O00488	134 aa	Predicted RBP	11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	DVL1	O14640	695 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	GAST	P01350	101 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	IGHV1-69	P01742	117 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	GYPA	P02724	150 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	GRP	P07492	148 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	FMO3	P31513	532 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	IER3	P46695	156 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	KRTAP10-3	P60369	221 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	ARF6	P62330	175 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	MZT1	Q08AG7	82 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	SPATS1	Q496A3	300 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	SAMD4B	Q5PRF9	694 aa	Known RBP	11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	METTL11B	Q5VVY1	283 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	LYPD4	Q6UWN0	246 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	RASSF6	Q6ZTQ3	369 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	BTN2A1	Q7KYR7	527 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	DCXR	Q7Z4W1	244 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	ZDHHC21	Q8IVQ6	265 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	BOLL	Q8N9W6	283 aa	Known RBP	11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	ZNF511	Q8NB15	262 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	LY6G5B	Q8NDX9	201 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	PROKR2	Q8NFJ6	384 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	SGK3	Q96BR1	496 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	SLAMF6	Q96DU3	332 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	NSMCE2	Q96MF7	247 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	CDRT15	Q96T59	188 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	BTBD10	Q9BSF8	475 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	OPA3	Q9H6K4	179 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	C14orf119	Q9NWQ9	140 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	LYVE1	Q9Y5Y7	322 aa		11.27	□□□□□ -0.61
RNF31-223	ENST00000560754	ARPC2	O15144	300 aa		11.26	□□□□□ -0.61
RNF31-223	ENST00000560754	XRCC2	O43543	280 aa		11.26	□□□□□ -0.61
RNF31-223	ENST00000560754	CLPX	O76031	633 aa		11.26	□□□□□ -0.61
RNF31-223	ENST00000560754	MUC1	P15941	1255 aa	Predicted RBP	11.26	□□□□□ -0.61
RNF31-223	ENST00000560754	ENTPD1	P49961	510 aa		11.26	□□□□□ -0.61
RNF31-223	ENST00000560754	PRKX	P51817	358 aa		11.26	□□□□□ -0.61
RNF31-223	ENST00000560754	SLC25A1	P53007	311 aa		11.26	□□□□□ -0.61
RNF31-223	ENST00000560754	FAM3A	P98173	230 aa		11.26	□□□□□ -0.61
RNF31-223	ENST00000560754	HSP90B2P	Q58FF3	399 aa		11.26	□□□□□ -0.61
RNF31-223	ENST00000560754	C17orf107	Q6ZR85	190 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms