RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787		J3QLI3	93 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	KHDRBS3	O75525	346 aa	Known RBP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	NDUFB2	O95178	105 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	FSHB	P01225	129 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	COX5B	P10606	129 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	SELE	P16581	610 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	KITLG	P21583	273 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	FPR3	P25089	353 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	PEX2	P28328	305 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	SDHA	P31040	664 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	LIPA	P38571	399 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	VHL	P40337	213 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	SLC6A9	P48067	706 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	HILS1	P60008	231 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	HOXA4	Q00056	320 aa	Predicted RBP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	SLC3A1	Q07837	685 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	TSPAN31	Q12999	210 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	AQP6	Q13520	282 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	RSPO1	Q2MKA7	263 aa	Predicted RBP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	ANKDD1A	Q495B1	522 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	FAM201A	Q5SY85	155 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	GPR139	Q6DWJ6	353 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	ZNF770	Q6IQ21	691 aa	Predicted RBP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	PGBD2	Q6P3X8	592 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	FAHD1	Q6P587	224 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	CD300LD	Q6UXZ3	194 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	TMEM179B	Q7Z7N9	219 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	NAA40	Q86UY6	237 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	JAZF1	Q86VZ6	243 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	LINC00346	Q8IVM7	164 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	BPIFB2	Q8N4F0	458 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	CBR4	Q8N4T8	237 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	ZNF283	Q8N7M2	679 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	SIGLECL1	Q8N7X8	197 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	C3orf56	Q8N813	242 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	ZDHHC22	Q8N966	263 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	AQP11	Q8NBQ7	271 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	NPEPL1	Q8NDH3	523 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	BHLHE23	Q8NDY6	225 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	DEFB108B	Q8NET1	73 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	OR10AD1	Q8NGE0	317 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	ZNF420	Q8TAQ5	688 aa	Predicted RBP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	NANP	Q8TBE9	248 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	GNPDA2	Q8TDQ7	276 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	ST7L	Q8TDW4	575 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	TAF15	Q92804	592 aa	Known RBP eCLIP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	DVL3	Q92997	716 aa	Predicted RBP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	PTP4A1	Q93096	173 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	SAMD8	Q96LT4	415 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	RDH12	Q96NR8	316 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	ERMAP	Q96PL5	475 aa	Predicted RBP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	OR2V2	Q96R30	315 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	SIGLEC11	Q96RL6	698 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	FEV	Q99581	238 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	FN3K	Q9H479	309 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	NRIP3	Q9NQ35	241 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	PAPOLB	Q9NRJ5	636 aa	Known RBP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	VSX1	Q9NZR4	365 aa	Predicted RBP	5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	PPP1R3C	Q9UQK1	317 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	PPIAL4A	Q9Y536	164 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	TRRAP	Q9Y4A5	3859 aa		5.87	□□□□□ -1.47
MARK3-215	ENST00000558787	IGLV1-36	A0A0B4J1U3	117 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	TMEM89	A2RUT3	159 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787		F5H5P2	479 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	TMEM178B	H3BS89	294 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787		H3BSA7	217 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	TRIM77	I1YAP6	450 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	EI24	O14681	340 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	AHCYL1	O43865	530 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	FOXH1	O75593	365 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	CYB5R3	P00387	301 aa	Predicted RBP	5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	GAST	P01350	101 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	HLA-DPB1	P04440	258 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	ALPL	P05186	524 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	TNFSF4	P23510	183 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	CD80	P33681	288 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	PMEL	P40967	661 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	GSS	P48637	474 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	HSPA13	P48723	471 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	DAP	P51397	102 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	RAD23A	P54725	363 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	LSM6	P62312	80 aa	Known RBP	5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	BTG1	P62324	171 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	PPP1R8	Q12972	351 aa	Known RBP	5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	SCGB2A2	Q13296	93 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	LRRC36	Q1X8D7	754 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	ZMAT1	Q5H9K5	638 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	KLF17	Q5JT82	389 aa	Predicted RBP	5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	SLC35F1	Q5T1Q4	408 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	LPCAT4	Q643R3	524 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	KDM4D	Q6B0I6	523 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	RPL13AP3	Q6NVV1	102 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	LEG1	Q6P5S2	330 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	DPY19L2P2	Q6ZN68	376 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	CFAP77	Q6ZQR2	320 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	USP43	Q70EL4	1123 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	ZER1	Q7Z7L7	766 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	MOGAT3	Q86VF5	341 aa		5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	LRRC28	Q86X40	367 aa	Predicted RBP	5.86	□□□□□ -1.47
MARK3-215	ENST00000558787	C1orf174	Q8IYL3	243 aa		5.86	□□□□□ -1.47

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