RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 TGFBR3Q03167 851 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 DPPA3Q6W0C5 159 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 MAMSTRQ6ZN01 415 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 PRR22Q8IZ63 422 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 OR2A1Q8NGT9 310 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 IGSF21Q96ID5 467 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 FAAP24Q9BTP7 215 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 FBXL17Q9UF56 701 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 ZNF107Q9UII5 783 aaPredicted RBP10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 R4GMQ9 66 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 ST8SIA5O15466 376 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 ZNF385CQ66K41 422 aaPredicted RBP10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 RNASEKQ6P5S7 137 aaKnown RBP10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 ABI3BPQ7Z7G0 1075 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 PIGTQ969N2 578 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 EXOGQ9Y2C4 368 aaKnown RBP10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 SPINT2O43291 252 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 SLC35E2P0CK97 266 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 CD82P27701 267 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 PPOXP50336 477 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 NHLH1Q02575 133 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 HHEXQ03014 270 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 NKAIN2Q5VXU1 208 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 OR2D3Q8NGH3 330 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 RBM14Q96PK6 669 aaKnown RBP10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 RAB40CQ96S21 281 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 ABHD1Q96SE0 405 aa10.68□□□□□ -0.7
CSPG4P12-201ENST00000558282 TJP1Q07157 1748 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 LOC102724200A0A096LPH7 203 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 SLC25A6P12236 298 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 CSN1S1P47710 185 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 RAB32Q13637 225 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 CST6Q15828 149 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 ATOH1Q92858 354 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 A0A0A6YYC8 382 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 C4orf47A7E2U8 309 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 I3L1I5 382 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 HMGA2P52926 109 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 IFITM3Q01628 133 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 GPM6BQ13491 265 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 SMAD6O43541 496 aaKnown RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 CRHP06850 196 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 BPIFB3P59826 476 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 Q1RN00 199 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 RPEL1Q2QD12 228 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 FAM27D1Q5T7N8 215 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 CD300LDQ6UXZ3 194 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 SLC16A11Q8NCK7 471 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 NEIL1Q96FI4 390 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 WFIKKN1Q96NZ8 548 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 UBR2Q8IWV8 1755 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 EIF4E2O60573 245 aaKnown RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 EIF3GO75821 320 aaKnown RBP eCLIP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 SNCGO76070 127 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 FAM3BP58499 235 aaPredicted RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 HIST3H3Q16695 136 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 ZNF343Q6P1L6 599 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 LIPHQ8WWY8 451 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 PIK3IP1Q96FE7 263 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 NRIP2Q9BQI9 281 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 BARHL1Q9BZE3 327 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 B3GAT1Q9P2W7 334 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 MCTS1Q9ULC4 181 aaKnown RBP10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 NWD2Q9ULI1 1742 aa10.67□□□□□ -0.7
CSPG4P12-201ENST00000558282 PRAMEF25A6NGN4 478 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 ZNF891A8MT65 544 aaPredicted RBP10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 TNFSF4P23510 183 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 SLC6A12P48065 614 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 RAC1P63000 192 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 HLA-DRB5Q30154 266 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 PRAMEF5Q5TYX0 476 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 PRAMEF6Q5VXH4 476 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 ABHD17CQ6PCB6 329 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 LRRTM3Q86VH5 581 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 TNFRSF12AQ9NP84 129 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 CLDND1Q9NY35 253 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 ADAMTS7Q9UKP4 1686 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 KIR2DS5A0A0G2JLQ3 304 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 A0A0G2JNG1 304 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 KIR2DS3K7RE56 304 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 C1SP09871 688 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 NPPBP16860 134 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 HOXD9P28356 352 aaPredicted RBP10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 MVDP53602 400 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 GUCA2AQ02747 115 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 KIR2DS5Q14953 304 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 ARIH2OSQ8N7S6 290 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 OR4B1Q8NGF8 309 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 NUBPLQ8TB37 319 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 HSD17B8Q92506 261 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 TP53RKQ96S44 253 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 TBX15Q96SF7 602 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 RAB33BQ9H082 229 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 SMG9Q9H0W8 520 aaKnown RBP10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 MANBALQ9NQG1 85 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 METTL1Q9UBP6 276 aaKnown RBP10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 PRSS50Q9UI38 385 aa10.66□□□□□ -0.7
CSPG4P12-201ENST00000558282 COA3Q9Y2R0 106 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms