RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TMEM234Q8WY98 164 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ST8SIA1Q92185 356 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TOPBP1Q92547 1522 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PTH2Q96A98 100 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ROBO3Q96MS0 1386 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF285Q96NJ3 590 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 COL21A1Q96P44 957 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DPH7Q9BTV6 452 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PAXXQ9BUH6 204 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 HCAR1Q9BXC0 346 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RNF17Q9BXT8 1623 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 QRICH2Q9H0J4 1663 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C1orf198Q9H425 327 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TRABDQ9H4I3 376 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM231Q9H6L2 316 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF430Q9H8G1 570 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF160Q9HCG1 818 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RAB9BQ9NP90 201 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SIRT7Q9NRC8 400 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DMAC2Q9NW81 257 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C1orf109Q9NX04 203 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 BFARQ9NZS9 450 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 WRAP73Q9P2S5 460 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 MRPS33Q9Y291 106 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RFNGQ9Y644 331 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 V9GYQ6 96 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CHD5Q8TDI0 1954 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PARP14Q460N5 1801 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ANKRD36CQ5JPF3 1778 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DISP2A7MBM2 1401 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 USP6P35125 1406 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DCCP43146 1447 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 FAM92AA1XBS5 289 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 BTN3A3O00478 584 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CLDN5O00501 218 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 FGF16O43320 207 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SGCEO43556 437 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SH3BGRLO75368 114 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 STK16O75716 305 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 UGT2B17O75795 530 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SRP72O76094 671 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 KCNK2O95069 426 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SCELO95171 688 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TDP2O95551 362 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM50AO95807 157 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CYB5R3P00387 301 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 MT-ND4P03905 459 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C2P06681 752 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ERCC1P07992 297 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TRAPPC2P0DI81 140 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TRAPPC2BP0DI82 140 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C8orf88P0DMB2 117 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 COX4I1P13073 169 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 HIST1H1BP16401 226 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 GCAP28676 217 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SSTR5P35346 364 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 MAGEA6P43360 314 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RORCP51449 518 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 LBX1P52954 281 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 UGT2B15P54855 530 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DEFA6Q01524 100 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF45Q02386 682 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ECSCRQ19T08 205 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PGGHGQ32M88 737 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RNF212Q495C1 297 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 UNC50Q53HI1 259 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RNASE10Q5GAN6 216 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DCAF12Q5T6F0 453 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C9orf135Q5VTT2 229 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SPINK14Q6IE38 97 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 HACD2Q6Y1H2 254 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 APTXQ7Z2E3 356 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 HORMAD1Q86X24 394 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 UBQLNLQ8IYU4 475 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CSNK1A1LQ8N752 337 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 NECAP1Q8NC96 275 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PROKR2Q8NFJ6 384 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 OR4C6Q8NH72 309 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ZFP90Q8TF47 636 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 IL1F10Q8WWZ1 152 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 ANKRD9Q96BM1 317 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 PAGE5Q96GU1 130 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CNBD2Q96M20 576 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 VSTM2LQ96N03 204 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 DEFB118Q96PH6 123 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 NPAS2Q99743 824 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 VGLL1Q99990 258 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 UTP23Q9BRU9 249 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C19orf24Q9BVV8 132 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 UGT1A8Q9HAW9 530 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 C6orf50Q9HD87 102 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 RAB18Q9NP72 206 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 LHX9Q9NQ69 397 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM216Q9P0N5 145 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 METTL1Q9UBP6 276 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 SEC14L4Q9UDX3 406 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 VPREB3Q9UKI3 123 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 NXT1Q9UKK6 140 aaKnown RBP1.31□□□□□ -2.2
HIF1A-212ENST00000557538 CLEC4EQ9ULY5 219 aa1.31□□□□□ -2.2
HIF1A-212ENST00000557538 NTNG1Q9Y2I2 539 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms