RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 OR4K13Q8NH42 304 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 OR52J3Q8NH60 311 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 NPRL2Q8WTW4 380 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 HOPXQ9BPY8 73 aaPredicted RBP8.1□□□□□ -1.11
CRX-203ENST00000556527 COPS4Q9BT78 406 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 SIRPDQ9H106 197 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 OPA3Q9H6K4 179 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 SMURF1Q9HCE7 757 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 CMTM6Q9NX76 183 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 MRPL15Q9P015 296 aaKnown RBP8.1□□□□□ -1.11
CRX-203ENST00000556527 KCNG2Q9UJ96 466 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 VPREB3Q9UKI3 123 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 KPTNQ9Y664 436 aa8.1□□□□□ -1.11
CRX-203ENST00000556527 TRBV4-1A0A0J9YWV2 114 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 ZNF816-ZNF321PA0A0X1KG74 233 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 C5orf63A6NC05 138 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 SLC22A2O15244 555 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 HIST1H1CP16403 213 aaKnown RBP8.09□□□□□ -1.11
CRX-203ENST00000556527 OMPP47874 163 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 ZNF92Q03936 586 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 POU4F2Q12837 409 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 RFX4Q33E94 735 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 DRAM2Q6UX65 266 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 CPLX4Q7Z7G2 160 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 NAA40Q86UY6 237 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 FAM90A1Q86YD7 464 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 SLC15A3Q8IY34 581 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 GALNT4Q8N4A0 578 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 ZSCAN4Q8NAM6 433 aaPredicted RBP8.09□□□□□ -1.11
CRX-203ENST00000556527 PROKR2Q8NFJ6 384 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 OR2AE1Q8NHA4 323 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 RP9Q8TA86 221 aaKnown RBP8.09□□□□□ -1.11
CRX-203ENST00000556527 FGFR1OP2Q9NVK5 253 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 CYB5R1Q9UHQ9 305 aa8.09□□□□□ -1.11
CRX-203ENST00000556527 RPUSD1Q9UJJ7 312 aaKnown RBP8.09□□□□□ -1.11
CRX-203ENST00000556527 SAMD4AQ9UPU9 718 aaKnown RBP8.09□□□□□ -1.11
CRX-203ENST00000556527 IGHV3OR15-7A0A075B7D8 119 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 ARPC3O15145 178 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 GPR37O15354 613 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 TBX1O43435 398 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 NDUFB3O43676 98 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 IDH3BO43837 385 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 GADD45GO95257 159 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 MUC1P15941 1255 aaPredicted RBP8.08□□□□□ -1.12
CRX-203ENST00000556527 NCK1P16333 377 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 GABRA5P31644 462 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 GNALP38405 381 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 NAA10P41227 235 aaPredicted RBP8.08□□□□□ -1.12
CRX-203ENST00000556527 GSK3BP49841 420 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 KRTAP10-3P60369 221 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 HOXA4Q00056 320 aaPredicted RBP8.08□□□□□ -1.12
CRX-203ENST00000556527 SPIBQ01892 262 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 EGR3Q06889 387 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 IKZF1Q13422 519 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 BLMHQ13867 455 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 RSPO1Q2MKA7 263 aaPredicted RBP8.08□□□□□ -1.12
CRX-203ENST00000556527 SNAI3Q3KNW1 292 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 KRTAP27-1Q3LI81 207 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 LRRC10Q5BKY1 277 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 GLYATL3Q5SZD4 288 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 Q6ZSV7 163 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 ZNF826PQ6ZT77 177 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 ZBTB46Q86UZ6 589 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 FTMTQ8N4E7 242 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 SDR9C7Q8NEX9 313 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 OR52L1Q8NGH7 329 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 OR5R1Q8NH85 324 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 H1FXQ92522 213 aaKnown RBP8.08□□□□□ -1.12
CRX-203ENST00000556527 MCUR1Q96AQ8 359 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 CCL13Q99616 98 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 OR52D1Q9H346 318 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 FN3KQ9H479 309 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 C16orf95Q9H693 158 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 EFCAB1Q9HAE3 211 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 SIRT7Q9NRC8 400 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 CENPMQ9NSP4 180 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 ARGLU1Q9NWB6 273 aaPredicted RBP8.08□□□□□ -1.12
CRX-203ENST00000556527 NDUFAF4Q9P032 175 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 DNAJB11Q9UBS4 358 aa8.08□□□□□ -1.12
CRX-203ENST00000556527 A0A1W2PRD5 423 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 A0A1W2PRF3 423 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 A0A1W2PRM7 423 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 MEIOCA2RUB1 952 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 NKX6-3A6NJ46 265 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 NME4O00746 187 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 NPFFO15130 113 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 XRCC2O43543 280 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 TIPRLO75663 272 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 DIRAS1O95057 198 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 ALX3O95076 343 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 PTBP3O95758 552 aaKnown RBP8.07□□□□□ -1.12
CRX-203ENST00000556527 SPARCP09486 303 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 COX4I1P13073 169 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 POU1F1P28069 291 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 DDOSTP39656 456 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 SLC15A1P46059 708 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 NUDT2P50583 147 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 PRKXP51817 358 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 FXYD6P3P58550 94 aa8.07□□□□□ -1.12
CRX-203ENST00000556527 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms