RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CCL1P22362 96 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 NR4A1P22736 598 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 CALCRP30988 508 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 CRYBB2P43320 205 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 PPP1CBP62140 327 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 RPS11P62280 158 aaKnown RBP eCLIP9.52□□□□□ -0.89
TMEM260-208ENST00000555905 BSPH1Q075Z2 132 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 Q499Y3 187 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 CD200R1LQ6Q8B3 271 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 RFPL4BQ6ZWI9 263 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 OR1J1Q8NGS3 322 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 OR13C5Q8NGS8 318 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 OR10AC1Q8NH08 325 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 OR2AE1Q8NHA4 323 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 ZNF420Q8TAQ5 688 aaPredicted RBP9.52□□□□□ -0.89
TMEM260-208ENST00000555905 SSC4DQ8WTU2 575 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 RAB2BQ8WUD1 216 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 RGP1Q92546 391 aaPredicted RBP9.52□□□□□ -0.89
TMEM260-208ENST00000555905 PHYHIPQ92561 330 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 SPSB4Q96A44 273 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 RADILQ96JH8 1075 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 LYZL4Q96KX0 146 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 BCL7BQ9BQE9 202 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 FAM192AQ9GZU8 254 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 PLEKHA1Q9HB21 404 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 PTTG3PQ9NZH4 202 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 GSTK1Q9Y2Q3 226 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 KLF2Q9Y5W3 355 aaPredicted RBP9.52□□□□□ -0.89
TMEM260-208ENST00000555905 CEPT1Q9Y6K0 416 aa9.52□□□□□ -0.89
TMEM260-208ENST00000555905 PRR14LQ5THK1 2151 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 UBR5O95071 2799 aaPredicted RBP9.51□□□□□ -0.89
TMEM260-208ENST00000555905 TRBV5-5A0A0J9YX44 114 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 A0A1B0GTI1 187 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 LOC390937A0A1W2PQ73 354 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 DPRXA6NFQ7 191 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ATP6V1G2-DDX39BF2Z307 99 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ABCD4O14678 606 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 GPX5O75715 221 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 DHRS3O75911 302 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ARL6IP5O75915 188 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 IGLV3-1P01715 115 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ZNF20P17024 532 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ANOS1P23352 680 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 FGF9P31371 208 aaPredicted RBP9.51□□□□□ -0.89
TMEM260-208ENST00000555905 MAP2K3P46734 347 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 SOX2P48431 317 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 GSK3AP49840 483 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 RPS23P62266 143 aaKnown RBP9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ZNF92Q03936 586 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 GK2Q14410 553 aaPredicted RBP9.51□□□□□ -0.89
TMEM260-208ENST00000555905 BEX5Q5H9J7 111 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ZMAT1Q5H9K5 638 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 NCMAPQ5T1S8 102 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 C22orf42Q6IC83 251 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 SLC22A25Q6T423 547 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 TMEM91Q6ZNR0 172 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 SLC16A12Q6ZSM3 486 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 PGAP1Q75T13 922 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 OR51A4Q8NGJ6 313 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 FAM222BQ8WU58 562 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 RPL3LQ92901 407 aaKnown RBP9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ITFG2Q969R8 447 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 TMEM106AQ96A25 262 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ISOC1Q96CN7 298 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 PLPPR2Q96GM1 343 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 OR14A2Q96R54 314 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 NAA50Q9GZZ1 169 aaKnown RBP9.51□□□□□ -0.89
TMEM260-208ENST00000555905 ZNF275Q9NSD4 429 aaPredicted RBP9.51□□□□□ -0.89
TMEM260-208ENST00000555905 TXNL4BQ9NX01 149 aaKnown RBP9.51□□□□□ -0.89
TMEM260-208ENST00000555905 CKLFQ9UBR5 152 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 RSL24D1Q9UHA3 163 aaKnown RBP9.51□□□□□ -0.89
TMEM260-208ENST00000555905 MYO18BQ8IUG5 2567 aa9.51□□□□□ -0.89
TMEM260-208ENST00000555905 GGT3PA6NGU5 568 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 A6NHS1 94 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 DHRS7CA6NNS2 312 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 ZNF701M0R085 212 aaPredicted RBP9.5□□□□□ -0.89
TMEM260-208ENST00000555905 SC5DO75845 299 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 RAF1P04049 648 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 CD3EP07766 207 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 RAC2P15153 192 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 MYL9P24844 172 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 GCH1P30793 250 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 LSM3P62310 102 aaKnown RBP9.5□□□□□ -0.89
TMEM260-208ENST00000555905 FAM3AP98173 230 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 SPOCK1Q08629 439 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 RIPPLY1Q0D2K3 151 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 SNTB2Q13425 540 aaKnown RBP9.5□□□□□ -0.89
TMEM260-208ENST00000555905 INSL4Q14641 139 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 HLXQ14774 488 aaPredicted RBP9.5□□□□□ -0.89
TMEM260-208ENST00000555905 CTF1Q16619 201 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 ZNF718Q3SXZ3 478 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 HSD17B12Q53GQ0 312 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 SPATA46Q5T0L3 261 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 UNQ9370/PRO34162Q6UXP9 181 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 FBXW12Q6X9E4 464 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 DMRTC2Q8IXT2 367 aaPredicted RBP9.5□□□□□ -0.89
TMEM260-208ENST00000555905 PLPP7Q8NBV4 271 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 NUP37Q8NFH4 326 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 SEMA6DQ8NFY4 1073 aa9.5□□□□□ -0.89
TMEM260-208ENST00000555905 OR14K1Q8NGZ2 314 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms