RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 RNF166Q96A37 237 aaPredicted RBP8.85□□□□□ -0.99
NEK9-205ENST00000555405 ISYNA1Q9NPH2 558 aa8.85□□□□□ -0.99
NEK9-205ENST00000555405 SLC17A5Q9NRA2 495 aa8.85□□□□□ -0.99
NEK9-205ENST00000555405 CKLFQ9UBR5 152 aa8.85□□□□□ -0.99
NEK9-205ENST00000555405 ZNF629Q9UEG4 869 aaPredicted RBP8.85□□□□□ -0.99
NEK9-205ENST00000555405 FAM230AA0A1W2PPH8 454 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 CRHP06850 196 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 CALCBP10092 127 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 RPS11P62280 158 aaKnown RBP eCLIP8.84□□□□□ -0.99
NEK9-205ENST00000555405 BDH1Q02338 343 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 ECH1Q13011 328 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 MALLQ13021 153 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 SLC25A35Q3KQZ1 300 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 GLYATL3Q5SZD4 288 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 WDR31Q8NA23 367 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 ASB5Q8WWX0 329 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 ADAT3Q96EY9 351 aaPredicted RBP8.84□□□□□ -0.99
NEK9-205ENST00000555405 ZFP3Q96NJ6 502 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 LINC00854A0A1B0GVQ3 168 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 APOC1P02654 83 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 CECR9P0C854 216 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 RAB3BP20337 219 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 GUSBP1Q15486 140 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 YIF1BQ5BJH7 314 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 SLC22A25Q6T423 547 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 DRAM2Q6UX65 266 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 RFPL4BQ6ZWI9 263 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 OR2J1Q9GZK6 312 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 KCNJ16Q9NPI9 418 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 NUFIP1Q9UHK0 495 aaKnown RBP8.84□□□□□ -0.99
NEK9-205ENST00000555405 FAM25AB3EWG3 89 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 FAM25CB3EWG5 89 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 FAM25GB3EWG6 89 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 FCER2P06734 321 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 RORCP51449 518 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 ACSM1Q08AH1 577 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 P2RY14Q15391 338 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 RNASE12Q5GAN4 147 aaKnown RBP8.84□□□□□ -0.99
NEK9-205ENST00000555405 FOXL2NBQ6ZUU3 175 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 OR1J2Q8NGS2 313 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 DERL3Q96Q80 235 aa8.84□□□□□ -0.99
NEK9-205ENST00000555405 PAPOLGQ9BWT3 736 aaKnown RBP8.84□□□□□ -0.99
NEK9-205ENST00000555405 UBCP0CG48 685 aaKnown RBP8.83□□□□□ -1
NEK9-205ENST00000555405 RBMXP38159 391 aaKnown RBP8.83□□□□□ -1
NEK9-205ENST00000555405 POU3F4P49335 361 aa8.83□□□□□ -1
NEK9-205ENST00000555405 MOB3CQ70IA8 216 aa8.83□□□□□ -1
NEK9-205ENST00000555405 SERPINA12Q8IW75 414 aa8.83□□□□□ -1
NEK9-205ENST00000555405 KCNK15Q9H427 330 aa8.83□□□□□ -1
NEK9-205ENST00000555405 NEK6Q9HC98 313 aa8.83□□□□□ -1
NEK9-205ENST00000555405 MAP1AP78559 2803 aaPredicted RBP8.83□□□□□ -1
NEK9-205ENST00000555405 CRYAAP02489 173 aa8.83□□□□□ -1
NEK9-205ENST00000555405 SNRPBP14678 240 aaKnown RBP8.83□□□□□ -1
NEK9-205ENST00000555405 CHRNB4P30926 498 aa8.83□□□□□ -1
NEK9-205ENST00000555405 ADORA2A-AS1P86434 159 aa8.83□□□□□ -1
NEK9-205ENST00000555405 GPR50Q13585 617 aa8.83□□□□□ -1
NEK9-205ENST00000555405 STEAP2Q8NFT2 490 aa8.83□□□□□ -1
NEK9-205ENST00000555405 OR56B2PQ8NGI1 322 aa8.83□□□□□ -1
NEK9-205ENST00000555405 FAM46BQ96A09 425 aa8.83□□□□□ -1
NEK9-205ENST00000555405 POM121L2Q96KW2 1035 aa8.83□□□□□ -1
NEK9-205ENST00000555405 LYZL4Q96KX0 146 aa8.83□□□□□ -1
NEK9-205ENST00000555405 POFUT1Q9H488 388 aa8.83□□□□□ -1
NEK9-205ENST00000555405 B3GNT2Q9NY97 397 aa8.83□□□□□ -1
NEK9-205ENST00000555405 ATP6V1G2-DDX39BF2Z307 99 aa8.82□□□□□ -1
NEK9-205ENST00000555405 MAGEB3O15480 346 aa8.82□□□□□ -1
NEK9-205ENST00000555405 ACHEP22303 614 aa8.82□□□□□ -1
NEK9-205ENST00000555405 AZGP1P25311 298 aaKnown RBP8.82□□□□□ -1
NEK9-205ENST00000555405 S100A5P33763 92 aa8.82□□□□□ -1
NEK9-205ENST00000555405 WNT5AP41221 380 aa8.82□□□□□ -1
NEK9-205ENST00000555405 SNU13P55769 128 aaKnown RBP8.82□□□□□ -1
NEK9-205ENST00000555405 OR10K2Q6IF99 312 aa8.82□□□□□ -1
NEK9-205ENST00000555405 ADAM5Q6NVV9 412 aa8.82□□□□□ -1
NEK9-205ENST00000555405 WFIKKN1Q96NZ8 548 aa8.82□□□□□ -1
NEK9-205ENST00000555405 DMRTA2Q96SC8 542 aa8.82□□□□□ -1
NEK9-205ENST00000555405 ARID1AO14497 2285 aa8.82□□□□□ -1
NEK9-205ENST00000555405 VGLL3A8MV65 326 aa8.82□□□□□ -1
NEK9-205ENST00000555405 CRYGSP22914 178 aa8.82□□□□□ -1
NEK9-205ENST00000555405 ACKR3P25106 362 aa8.82□□□□□ -1
NEK9-205ENST00000555405 MAPK3P27361 379 aaPredicted RBP8.82□□□□□ -1
NEK9-205ENST00000555405 CCR9P51686 369 aa8.82□□□□□ -1
NEK9-205ENST00000555405 MRPL28Q13084 256 aaKnown RBP8.82□□□□□ -1
NEK9-205ENST00000555405 TRAM1Q15629 374 aa8.82□□□□□ -1
NEK9-205ENST00000555405 RNF144BQ7Z419 303 aa8.82□□□□□ -1
NEK9-205ENST00000555405 SEMA6DQ8NFY4 1073 aa8.82□□□□□ -1
NEK9-205ENST00000555405 OR52H1Q8NGJ2 320 aa8.82□□□□□ -1
NEK9-205ENST00000555405 SLC25A40Q8TBP6 338 aa8.82□□□□□ -1
NEK9-205ENST00000555405 DYNC2LI1Q8TCX1 351 aa8.82□□□□□ -1
NEK9-205ENST00000555405 CMBLQ96DG6 245 aa8.82□□□□□ -1
NEK9-205ENST00000555405 COQ7Q99807 217 aa8.82□□□□□ -1
NEK9-205ENST00000555405 BARHL1Q9BZE3 327 aa8.82□□□□□ -1
NEK9-205ENST00000555405 A0A075B6Q4 140 aa8.82□□□□□ -1
NEK9-205ENST00000555405 A0A1B0GTI1 187 aa8.82□□□□□ -1
NEK9-205ENST00000555405 ZNF850A8MQ14 1090 aa8.82□□□□□ -1
NEK9-205ENST00000555405 B8ZZF3 427 aa8.82□□□□□ -1
NEK9-205ENST00000555405 MTRF1O75570 445 aaKnown RBP8.82□□□□□ -1
NEK9-205ENST00000555405 CBR1P16152 277 aa8.82□□□□□ -1
NEK9-205ENST00000555405 UGT2B10P36537 528 aa8.82□□□□□ -1
NEK9-205ENST00000555405 SNTB2Q13425 540 aaKnown RBP8.82□□□□□ -1
NEK9-205ENST00000555405 GK2Q14410 553 aaPredicted RBP8.82□□□□□ -1
NEK9-205ENST00000555405 ZNF404Q494X3 552 aa8.82□□□□□ -1
NEK9-205ENST00000555405 PAMR1Q6UXH9 720 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms