RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 LYRM4Q9HD34 91 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 AGPAT4Q9NRZ5 378 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 DDX19AQ9NUU7 478 aaKnown RBP3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 CLN6Q9NWW5 311 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 PSME2Q9UL46 239 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 HYOU1Q9Y4L1 999 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 TMEM14AQ9Y6G1 99 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 SLIT3O75094 1523 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 LRP6O75581 1613 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 USP32Q8NFA0 1604 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 CAMTA1Q9Y6Y1 1673 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 NWD2Q9ULI1 1742 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 A0A0C4DFX4 3053 aa3.32□□□□□ -1.88
CKS1BP1-201ENST00000555221 UBN2Q6ZU65 1347 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 IGLV4-60A0A075B6I1 120 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 TSPAN11A1L157 253 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 NCBP2LA6PVI3 153 aaKnown RBP3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 RSPH10B2B2RC85 870 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 SLC9A3R1O14745 358 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 ZNF324O75467 553 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 FCN3O75636 299 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 HPRT1P00492 218 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 CISD3P0C7P0 127 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 RSPH10BP0C881 870 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 STAG3L3P0CL85 134 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 CTRB1P17538 263 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 DTYMKP23919 212 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 RPS5P46782 204 aaKnown RBP3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 PRR3P79522 188 aaKnown RBP3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 RAD51Q06609 339 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 ART3Q13508 389 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 FAM78AQ5JUQ0 283 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 TMCO2Q7Z6W1 182 aaPredicted RBP3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 APRG1Q8IVJ8 170 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 FAM71AQ8IYT1 594 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 C8orf31Q8N9H6 132 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 OR10AD1Q8NGE0 317 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 OR52E5Q8NH55 327 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 PIFOQ8TCI5 191 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 OPALINQ96PE5 141 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 ZNF382Q96SR6 550 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 TIMM17AQ99595 171 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 C12orf10Q9HB07 376 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 MYEF2Q9P2K5 600 aaKnown RBP3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 LRP4O75096 1905 aa3.31□□□□□ -1.88
CKS1BP1-201ENST00000555221 RGPD8O14715 1765 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 ALS2Q96Q42 1657 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 DISP2A7MBM2 1401 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 A0A1W2PRD5 423 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 NCF1BA6NI72 391 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 NCF1CA8MVU1 366 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 L7N2F9 121 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 BET1O15155 118 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 UBCP0CG48 685 aaKnown RBP3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 RALBP11234 206 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 SLC1A2P43004 574 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 RCAN2Q14206 197 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 KIR2DS1Q14954 304 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 TCEAL5Q5H9L2 206 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 AVPI1Q5T686 147 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 CALHM1Q8IU99 346 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 CBLN2Q8IUK8 224 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 RIMKLAQ8IXN7 391 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 COX18Q8N8Q8 333 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 COQ8AQ8NI60 647 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 GLYATL2Q8WU03 294 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 C15orf40Q8WUR7 153 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 TCEAL3Q969E4 200 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 COL21A1Q96P44 957 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 PIGUQ9H490 435 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 EDA2RQ9HAV5 297 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 ACP6Q9NPH0 428 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 ZNF355PQ9NSJ1 428 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 DDX18Q9NVP1 670 aaKnown RBP3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 RCL1Q9Y2P8 373 aaKnown RBP3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 YTHDF2Q9Y5A9 579 aaKnown RBP3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 TRPM3Q9HCF6 1732 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 TOPAZ1Q8N9V7 1692 aa3.3□□□□□ -1.88
CKS1BP1-201ENST00000555221 NFAT5O94916 1531 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 RGS12O14924 1447 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 TNS2Q63HR2 1409 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 PKD1L2Q7Z442 2459 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 MAP3K5Q99683 1374 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 TTC41PQ6P2S7 1318 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 IGKV2-28A0A075B6P5 120 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 SEMA3DO95025 777 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 VAMP5O95183 116 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 IGKV2D-28P01615 120 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 IFNW1P05000 195 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 CTSLP07711 333 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 CSNK2A2P19784 350 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 RAB4AP20338 218 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 IL32P24001 234 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 CLDN18P56856 261 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 SYNJ2BPP57105 145 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 ZNF121P58317 390 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 SYCNQ0VAF6 134 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 STK11Q15831 433 aa3.29□□□□□ -1.88
CKS1BP1-201ENST00000555221 TRMT5Q32P41 509 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms