RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 C12orf71A8MTZ7 269 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 PRR32B1ATL7 298 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 PTGES3LE9PB15 166 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 RAD51DO75771 328 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 IGLV2-14P01704 120 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 HLA-HP01893 362 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CDK1P06493 297 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 HTR1AP08908 422 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CST2P09228 141 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 MMP7P09237 267 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-212ENST00000554486 SPARCP09486 303 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 RNF224P0DH78 156 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 OR8G3PP0DMU2 310 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF823P16415 610 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ALOX5APP20292 161 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CD79BP40259 229 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 GUCA1AP43080 201 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ASCL1P50553 236 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CDH15P55291 814 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 TUBA1BP68363 451 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 TUBA4AP68366 448 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 HIST1H3AP68431 136 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 TGFBR3Q03167 851 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF85Q03923 595 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 TFF3Q07654 80 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 SRSF1Q07955 248 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ST3GAL4Q11206 333 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 RAB40BQ12829 278 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 TBRG1Q3YBR2 411 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 KCTD21Q4G0X4 260 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 HIKESHIQ53FT3 197 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 KLHL22Q53GT1 634 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 HIST2H3PS2Q5TEC6 136 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 SLC18B1Q6NT16 456 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CCDC144NLQ6NUI1 221 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CORO6Q6QEF8 472 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CFAP77Q6ZQR2 320 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 HIST2H3AQ71DI3 136 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 TUBA1AQ71U36 451 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 BHLHA15Q7RTS1 189 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-212ENST00000554486 SSX6Q7RTT6 188 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 DPY19L4Q7Z388 723 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CDC20BQ86Y33 519 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 LINC00346Q8IVM7 164 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 SLC35F2Q8IXU6 374 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 LRRC18Q8N456 261 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 WDR31Q8NA23 367 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF540Q8NDQ6 660 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 OR10H4Q8NGA5 316 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 OR10S1Q8NGN2 331 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 OTOSQ8NHW6 89 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ST7LQ8TDW4 575 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 NR1H4Q96RI1 486 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-212ENST00000554486 AMELYQ99218 206 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 TBX5Q99593 518 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 COPS4Q9BT78 406 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 WNT5BQ9H1J7 359 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF696Q9H7X3 374 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 NOX3Q9HBY0 568 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 SLC17A5Q9NRA2 495 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 GAR1Q9NY12 217 aaKnown RBP5.45□□□□□ -1.54
SCFD1-212ENST00000554486 SCN3BQ9NY72 215 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 B3GNT2Q9NY97 397 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ELOVL5Q9NYP7 299 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 COQ3Q9NZJ6 369 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ERVK-18Q9QC07 812 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CYB5R1Q9UHQ9 305 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 POLR1DQ9Y2S0 133 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 TPRKBQ9Y3C4 175 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 COX11Q9Y6N1 276 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 COL12A1Q99715 3063 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 ARPC4-TTLL3A0A0A6YYG9 625 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 IRGMA1A4Y4 181 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 WIPF3A6NGB9 483 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 OR5H1A6NKK0 313 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 C16orf97H3BN30 126 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 RER1O15258 196 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 UTP20O75691 2785 aaKnown RBP5.44□□□□□ -1.54
SCFD1-212ENST00000554486 RAB36O95755 333 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 FADS2O95864 444 aaKnown RBP5.44□□□□□ -1.54
SCFD1-212ENST00000554486 MT-ND2P03891 347 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 ROS1P08922 2347 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 OR2T7P0C7T2 308 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 LIMS3P0CW19 117 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 LIMS4P0CW20 117 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 CD79AP11912 226 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 PLA2G2AP14555 144 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF32P17041 273 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 AGAP20933 346 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 IL32P24001 234 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 DCKP27707 260 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 C21orf33P30042 268 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-212ENST00000554486 UGT2B10P36537 528 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 ATP6V1E1P36543 226 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 ETV1P50549 477 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 PROK1P58294 105 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 GABARAPL2P60520 117 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 PSG4Q00888 419 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 AQP6Q13520 282 aa5.44□□□□□ -1.54
SCFD1-212ENST00000554486 EIF2B1Q14232 305 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms