RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CASP8Q14790 479 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF726P1Q15940 193 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 COX19Q49B96 90 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 KLF17Q5JT82 389 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-211ENST00000554437 TIMM23BQ5SRD1 257 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 RESP18Q5W5W9 173 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 TTC33Q6PID6 262 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-211ENST00000554437 C12orf54Q6X4T0 127 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 C17orf82Q86X59 251 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-211ENST00000554437 SKA3Q8IX90 412 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 RDH10Q8IZV5 341 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 CYP4Z2PQ8N1L4 340 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM156Q8N614 296 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 LFNGQ8NES3 379 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 OR2A1Q8NGT9 310 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 OR8U1Q8NH10 309 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 PHOSPHO2Q8TCD6 241 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 MCOLN3Q8TDD5 553 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 DOK4Q8TEW6 326 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 RNF138Q8WVD3 245 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 RCN3Q96D15 328 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 OTUB2Q96DC9 234 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 PIK3IP1Q96FE7 263 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 ADTRPQ96IZ2 230 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF681Q96N22 645 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 SELENOSQ9BQE4 189 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 SRXN1Q9BYN0 137 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 OR51V1Q9H2C8 321 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 ASCL3Q9NQ33 180 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 PRO0461Q9UI25 63 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 FBXL3Q9UKT7 428 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 ASF1AQ9Y294 204 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 V9GY05 133 aa3.39□□□□□ -1.87
SCFD1-211ENST00000554437 IGHV1OR15-1A0A075B7D0 117 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 HIDE1A8MVS5 230 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 SLC16A4O15374 487 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 NUPL2O15504 423 aaKnown RBP3.38□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF861PO60384 105 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 DPM1O60762 260 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 UTS2O95399 124 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 NSA2O95478 260 aaKnown RBP3.38□□□□□ -1.87
SCFD1-211ENST00000554437 ORM1P02763 201 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 IFNA6P05013 189 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 HOXC4P09017 264 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-211ENST00000554437 CTXN2P0C2S0 81 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 LIPCP11150 499 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 CXCR2P25025 360 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 ARL2P36404 184 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 GPR6P46095 362 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-211ENST00000554437 TIMM10P62072 90 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 SARNPP82979 210 aaKnown RBP3.38□□□□□ -1.87
SCFD1-211ENST00000554437 HMGCS1Q01581 520 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 TGFBR3Q03167 851 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 PRKCDQ05655 676 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 RAB31Q13636 194 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 CLINT1Q14677 625 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 OR7A5Q15622 319 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 SNCBQ16143 134 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 UBE2UQ5VVX9 321 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 MRPL52Q86TS9 123 aaKnown RBP3.38□□□□□ -1.87
SCFD1-211ENST00000554437 CBLN2Q8IUK8 224 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 CA13Q8N1Q1 262 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 RNF175Q8N4F7 328 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM251Q8N6I4 163 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 OR10R2Q8NGX6 335 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 SFXN5Q8TD22 340 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 APH1BQ8WW43 257 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 ARPC1AQ92747 370 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM54Q969K7 222 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 S100PBPQ96BU1 408 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 FLYWCH2Q96CP2 140 aaKnown RBP3.38□□□□□ -1.87
SCFD1-211ENST00000554437 WDR34Q96EX3 536 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 SELENOIQ9C0D9 397 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 SLC40A1Q9NP59 571 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 KCNJ16Q9NPI9 418 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 CFL2Q9Y281 166 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 ACOT9Q9Y305 439 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 SNX24Q9Y343 169 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 LRRC42Q9Y546 428 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 ELP1O95163 1332 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 TTC21AQ8NDW8 1320 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 MSH6P52701 1360 aa3.38□□□□□ -1.87
SCFD1-211ENST00000554437 RBMY1BA6NDE4 496 aaKnown RBP3.37□□□□□ -1.87
SCFD1-211ENST00000554437 A6NDN8 102 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 RBMY1EA6NEQ0 496 aaKnown RBP3.37□□□□□ -1.87
SCFD1-211ENST00000554437 ERVV-1B6SEH8 477 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 TRIM49D1C9J1S8 452 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 PANO1I0J062 215 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 GABRPO00591 440 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 ATP8B1O43520 1251 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 CDC40O60508 579 aaKnown RBP eCLIP3.37□□□□□ -1.87
SCFD1-211ENST00000554437 SLC16A7O60669 478 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 SNAP29O95721 258 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 HPRT1P00492 218 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 HPNP05981 417 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 RETP07949 1114 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 RBMY1DP0C7P1 496 aaKnown RBP3.37□□□□□ -1.87
SCFD1-211ENST00000554437 RBMY1A1P0DJD3 496 aaKnown RBP3.37□□□□□ -1.87
SCFD1-211ENST00000554437 COX5BP10606 129 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 FOLR1P15328 257 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms