RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SLC16A9Q7RTY1 509 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 KRT77Q7Z794 578 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 OR5AS1Q8N127 324 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 TCEANCQ8N8B7 351 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 OR13G1Q8NGZ3 307 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 TMEM163Q8TC26 289 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 RAB1CQ92928 201 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 RFKQ969G6 155 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 MNTQ99583 582 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 CIB1Q99828 191 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 C1QTNF5Q9BXJ0 243 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 MROQ9BYG7 248 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 SLC22A4Q9H015 551 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 NIPAL2Q9H841 368 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 ZMAT4Q9H898 229 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 DDX28Q9NUL7 540 aaKnown RBP7.11□□□□□ -1.27
PSEN1-209ENST00000553855 TMEM100Q9NV29 134 aa7.11□□□□□ -1.27
PSEN1-209ENST00000553855 CLDN25C9JDP6 229 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF670-ZNF695F2Z2N8 137 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 IFNL4K9M1U5 179 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 EI24O14681 340 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 CDC14BO60729 498 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 IGHV1-46P01743 117 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 HPXP02790 462 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 NAA10P41227 235 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-209ENST00000553855 MAGEB1P43366 347 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 CX3CR1P49238 355 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 SRP9P49458 86 aaKnown RBP7.1□□□□□ -1.27
PSEN1-209ENST00000553855 ALDH3A2P51648 485 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 CDH15P55291 814 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 ODF1Q14990 250 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 ZSCAN26Q16670 478 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 PCK2Q16822 640 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 TIGD6Q17RP2 521 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 LINC01590Q5TEZ4 76 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 CYB5R2Q6BCY4 276 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 OR2T2Q6IF00 324 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 DNM1P46Q6ZS02 220 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 USP51Q70EK9 711 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 MEPCEQ7L2J0 689 aaKnown RBP7.1□□□□□ -1.27
PSEN1-209ENST00000553855 TIGD4Q8IY51 512 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 PQLC1Q8N2U9 271 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 CIARTQ8N365 385 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-209ENST00000553855 FTMTQ8N4E7 242 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 CBR4Q8N4T8 237 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 MAPK1IP1LQ8NDC0 245 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF555Q8NEP9 628 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 OR8G5Q8NG78 346 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 OR2Z1Q8NG97 314 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 OR52H1Q8NGJ2 320 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 OR8J1Q8NGP2 316 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 OTOSQ8NHW6 89 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 FAM81AQ8TBF8 368 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 RNF133Q8WVZ7 376 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 ZNRF4Q8WWF5 429 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 TRUB1Q8WWH5 349 aaKnown RBP7.1□□□□□ -1.27
PSEN1-209ENST00000553855 ASB17Q8WXJ9 295 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 PGAM5Q96HS1 289 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 IL4I1Q96RQ9 567 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 MYCBPQ99417 103 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-209ENST00000553855 CNN2Q99439 309 aaKnown RBP7.1□□□□□ -1.27
PSEN1-209ENST00000553855 TEAD3Q99594 435 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 ABHD6Q9BV23 337 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 BPESC1Q9GZL8 116 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 YIPF3Q9GZM5 350 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 OR10A2Q9H208 303 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 MARCH7Q9H992 704 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 MSL2Q9HCI7 577 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 USE1Q9NZ43 259 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 DNAJC27Q9NZQ0 273 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 IKZF2Q9UKS7 526 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 USF3Q68DE3 2245 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 ARID1AO14497 2285 aa7.1□□□□□ -1.27
PSEN1-209ENST00000553855 SETD2Q9BYW2 2564 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 ZSCAN5BA6NJL1 495 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 LRRC30A6NM36 301 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 ANKRD30BLA7E2S9 258 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 IQCF6A8MYZ5 107 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 PRKYO43930 277 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 MPZL2O60487 215 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 SELENOFO60613 162 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF254O75437 659 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 LY6G6DO95868 133 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 ADH4P08319 380 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 MRPL3P09001 348 aaKnown RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 IRF2P14316 349 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 GIFP27352 417 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 DDOSTP39656 456 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 CRYBB2P43320 205 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 MMP15P51511 669 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 RIDAP52758 137 aaKnown RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 DBPQ10586 325 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 TMED1Q13445 227 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 HLXQ14774 488 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 TMEM249Q2WGJ8 235 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF829Q3KNS6 432 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 C12orf73Q69YU5 71 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 COLCA1Q6ZS62 124 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 FAM57BQ71RH2 274 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 COMMD2Q86X83 199 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms