RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ITCHQ96J02 903 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 OXGR1Q96P68 337 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 TSG101Q99816 390 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ARHGDIGQ99819 225 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 RARRES2Q99969 163 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 BCL7BQ9BQE9 202 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 RSPO3Q9BXY4 272 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 IL22Q9GZX6 179 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 STMN4Q9H169 189 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 RNF167Q9H6Y7 350 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 CLN8Q9UBY8 286 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF282Q9UDV7 671 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-210ENST00000553693 STK38LQ9Y2H1 464 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 UBIAD1Q9Y5Z9 338 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 SLC25A15Q9Y619 301 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 MIA3Q5JRA6 1907 aa2.19□□□□□ -2.06
SCFD1-210ENST00000553693 DOCK8Q8NF50 2099 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 SPAARA0A1B0GVQ0 90 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 TMEM120BA0PK00 339 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 ERICH4A6NGS2 130 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 TMX2-CTNND1H3BSU7 103 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 TEX46H3BTG2 121 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 K7N7A8 449 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 EIF3HO15372 352 aaKnown RBP eCLIP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CCL16O15467 120 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 SPOPO43791 374 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CDC40O60508 579 aaKnown RBP eCLIP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CTAG2O75638 210 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 C1orf105O95561 183 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CCNE2O96020 404 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 UBCP0CG48 685 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 GZMAP12544 262 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 AK4P27144 223 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 AQP1P29972 269 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 NSG1P42857 185 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 GPR6P46095 362 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 TFPI2P48307 235 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 PSMD4P55036 377 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CARD18P57730 90 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 PDIA2Q13087 525 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 ITGB3BPQ13352 177 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 UNC119Q13432 240 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 UBE2SQ16763 222 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 ZBED5Q49AG3 693 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 KLF17Q5JT82 389 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 COA6Q5JTJ3 125 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 C1orf100Q5SVJ3 147 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 GPRC6AQ5T6X5 926 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CERS6Q6ZMG9 384 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 LINC00523Q86TU6 105 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 TMEM61Q8N0U2 210 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 PUSL1Q8N0Z8 303 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 PDCL2Q8N4E4 241 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 MS4A15Q8N5U1 240 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 METTL13Q8N6R0 699 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF557Q8N988 423 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 INO80EQ8NBZ0 244 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 TMEM104Q8NE00 496 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 DEFB124Q8NES8 71 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 LYPD6BQ8NI32 183 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 GLYATL2Q8WU03 294 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CAPSLQ8WWF8 208 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 ING5Q8WYH8 240 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 ESR2Q92731 530 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CERS2Q96G23 380 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 MED8Q96G25 268 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 DNAJC1Q96KC8 554 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 PKNOX2Q96KN3 472 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 SIKE1Q9BRV8 207 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 PIGUQ9H490 435 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 XKR8Q9H6D3 395 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 MRPS30Q9NP92 439 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 DYRK4Q9NR20 520 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 MTCH1Q9NZJ7 389 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CCDC59Q9P031 241 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 MYEF2Q9P2K5 600 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 NUFIP1Q9UHK0 495 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 ING4Q9UNL4 249 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 NEUROG3Q9Y4Z2 214 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 BZW2Q9Y6E2 419 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 CNOT1A5YKK6 2376 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 TICRRQ7Z2Z1 1910 aa2.18□□□□□ -2.06
SCFD1-210ENST00000553693 SMG1Q96Q15 3661 aaKnown RBP2.18□□□□□ -2.06
SCFD1-210ENST00000553693 NAV2Q8IVL1 2488 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 CFAP46Q8IYW2 2715 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 TRAV25A0A0B4J276 109 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 A0A0D9SFI3 127 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 KIR2DL5BA0A0G2JN68 375 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 KIR2DL5BA0A0G2JPC4 375 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 GLYATL1P3A0A0U1RQE8 302 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 A0A1W2PRD5 423 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 GJE1A6NN92 205 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 CENPXA8MT69 81 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 H3BNH8 94 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 BCKDKO14874 412 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 AKR7A2O43488 359 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF780AO75290 641 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 EIF3GO75821 320 aaKnown RBP eCLIP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 OTCP00480 354 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ACSM4P0C7M7 580 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms