RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 RAD1O60671 282 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 DNAH10OSP0CZ25 163 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 THRAP10827 490 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 CCL2P13500 99 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 BGNP21810 368 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 ARL2P36404 184 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 MNAT1P51948 309 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 NDUFA8P51970 172 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 UCNP55089 124 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 CACNG7P62955 275 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 TNNC1P63316 161 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 KDSRQ06136 332 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 CPTPQ5TA50 214 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 TSPO2Q5TGU0 170 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 DUPD1Q68J44 220 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 OR2T5Q6IEZ7 315 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 APOBEC3HQ6NTF7 200 aaKnown RBP3.28□□□□□ -1.88
SCFD1-209ENST00000553280 TMEM205Q6UW68 189 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 RBM45Q8IUH3 476 aaKnown RBP3.28□□□□□ -1.88
SCFD1-209ENST00000553280 NKAIN4Q8IVV8 208 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 SYS1Q8N2H4 156 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 LINC00469Q8N7U9 141 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 UBAC2Q8NBM4 344 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 OR2T29Q8NH02 315 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 LILRB4Q8NHJ6 448 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 SAMD10Q9BYL1 202 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 PRRG3Q9BZD7 231 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 NYAP2Q9P242 653 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 CFAP45Q9UL16 551 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 RBMX2Q9Y388 322 aaKnown RBP3.28□□□□□ -1.88
SCFD1-209ENST00000553280 HYOU1Q9Y4L1 999 aa3.28□□□□□ -1.88
SCFD1-209ENST00000553280 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 A0A0A6YYD5 115 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 ANKRD20A5PA0PJZ0 165 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 RAB19A4D1S5 217 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 DFFAO00273 331 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 PRMT5O14744 637 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-209ENST00000553280 GATCO43716 136 aaKnown RBP3.27□□□□□ -1.89
SCFD1-209ENST00000553280 ZMPSTE24O75844 475 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 GCGP01275 180 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 RHOCP08134 193 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 IGHV1-8P0DP01 117 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 CD70P32970 193 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 DRD3P35462 400 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 DEKP35659 375 aaKnown RBP3.27□□□□□ -1.89
SCFD1-209ENST00000553280 CD151P48509 253 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 HCCSP53701 268 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 RAP1AP62834 184 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 ST3GAL4Q11206 333 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 ZNF658BQ4V348 819 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-209ENST00000553280 TFDP3Q5H9I0 405 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 ZNF786Q8N393 782 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 OR51A7Q8NH64 312 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 C15orf40Q8WUR7 153 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 SRSF12Q8WXF0 261 aaKnown RBP3.27□□□□□ -1.89
SCFD1-209ENST00000553280 PTX4Q96A99 478 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 ZBED3Q96IU2 234 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-209ENST00000553280 TEAD3Q99594 435 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 TSNAXQ99598 290 aaKnown RBP3.27□□□□□ -1.89
SCFD1-209ENST00000553280 HSD17B10Q99714 261 aaKnown RBP3.27□□□□□ -1.89
SCFD1-209ENST00000553280 GABRG3Q99928 467 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 ZNF442Q9H7R0 627 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 VCX3AQ9NNX9 186 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 HMG20AQ9NP66 347 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 ZDHHC4Q9NPG8 344 aa3.27□□□□□ -1.89
SCFD1-209ENST00000553280 GPATCH8Q9UKJ3 1502 aaKnown RBP3.27□□□□□ -1.89
SCFD1-209ENST00000553280 HSBP1L1C9JCN9 74 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 LINC01619G3V211 115 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 H7C2Y5 167 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 YIF1AO95070 293 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 PTTG1O95997 202 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 NPPAP01160 153 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 PTHP01270 115 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 PRKACBP22694 351 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 DTYMKP23919 212 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 GNRHRP30968 328 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 LCN1P31025 176 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 GGT2P36268 569 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 TAS2R46P59540 309 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 RPL23P62829 140 aaKnown RBP3.26□□□□□ -1.89
SCFD1-209ENST00000553280 RPL31P62899 125 aaKnown RBP3.26□□□□□ -1.89
SCFD1-209ENST00000553280 MADCAM1Q13477 382 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 CD300LGQ6UXG3 332 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 TCAIMQ8N3R3 496 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 TMEM234Q8WY98 164 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 FAM19A4Q96LR4 140 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 CAMK2N2Q96S95 79 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 SLC25A39Q9BZJ4 359 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-209ENST00000553280 TOLLIPQ9H0E2 274 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 C12orf10Q9HB07 376 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 DDX19AQ9NUU7 478 aaKnown RBP3.26□□□□□ -1.89
SCFD1-209ENST00000553280 KLF12Q9Y4X4 402 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 CDC42BPBQ9Y5S2 1711 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 SCN2AQ99250 2005 aa3.26□□□□□ -1.89
SCFD1-209ENST00000553280 IGHV2OR16-5A0A0B4J2B6 119 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 A0A0U1RQV1 116 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 GOLGA8JA6NMD2 632 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 TAAR5O14804 337 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 RRP8O43159 456 aaKnown RBP3.25□□□□□ -1.89
SCFD1-209ENST00000553280 ALOX12BO75342 701 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms