RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SMIM10L1P0DMW3 83 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 PSG2P11465 335 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 COX6B1P14854 86 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 CCNCP24863 283 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 NMUP48645 174 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 CDH6P55285 790 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 RPS21P63220 83 aaKnown RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 EIF3IQ13347 325 aaKnown RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 PSG5Q15238 335 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 ZNF658BQ4V348 819 aaPredicted RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 COA6Q5JTJ3 125 aaKnown RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 CYB5R2Q6BCY4 276 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 SASS6Q6UVJ0 657 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 CD300LGQ6UXG3 332 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 ZNF836Q6ZNA1 936 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 CCDC73Q6ZRK6 1079 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 BIVMQ86UB2 503 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 BBS5Q8N3I7 341 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 GTPBP8Q8N3Z3 284 aaPredicted RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 OTUD6BQ8N6M0 293 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 ZNF433Q8N7K0 673 aaPredicted RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 HSD17B11Q8NBQ5 300 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 CCDC54Q8NEL0 328 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 ACMSDQ8TDX5 336 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 ELMO1Q92556 727 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 TMEM54Q969K7 222 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 ZNF799Q96GE5 643 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 SMIM10Q96HG1 83 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 ATP5SQ99766 215 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 OSBPL10Q9BXB5 764 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 DNTTIP1Q9H147 329 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 PSTPIP2Q9H939 334 aa3.18□□□□□ -1.9
LIMA1-205ENST00000550592 DMAP1Q9NPF5 467 aaPredicted RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 ZNF331Q9NQX6 463 aaPredicted RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 STOX2Q9P2F5 926 aaPredicted RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 F11RQ9Y624 299 aaKnown RBP3.18□□□□□ -1.9
LIMA1-205ENST00000550592 GTF3C1Q12789 2109 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 PKD1L1Q8TDX9 2849 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 MYOFQ9NZM1 2061 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 TRBV6-6A0A0A6YYG2 114 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 TRAV19A0A0A6YYK7 116 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 MKRN2OSH3BPM6 223 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 TMX2-CTNND1H3BSU7 103 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 XKRYO14609 159 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 SLC9A3R1O14745 358 aaPredicted RBP3.17□□□□□ -1.9
LIMA1-205ENST00000550592 CA11O75493 328 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 AGTP01019 485 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 IGLV3-19P01714 112 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 CD82P27701 267 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 NSG1P42857 185 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 TUFMP49411 452 aaKnown RBP3.17□□□□□ -1.9
LIMA1-205ENST00000550592 RORCP51449 518 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 SSR4P51571 173 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 CCNHP51946 323 aaPredicted RBP3.17□□□□□ -1.9
LIMA1-205ENST00000550592 KDSRQ06136 332 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 CARD17Q5XLA6 110 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 OR4C5Q8NGB2 326 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 OR51G1Q8NGK1 321 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 RHEBL1Q8TAI7 183 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 ESR2Q92731 530 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 ASB9Q96DX5 294 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 CPB2Q96IY4 423 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 GABRG3Q99928 467 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 DEC1Q9P2X7 70 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 PCYOX1Q9UHG3 505 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 ANK1P16157 1881 aa3.17□□□□□ -1.9
LIMA1-205ENST00000550592 CSMD2Q7Z408 3487 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 AKAP9Q99996 3911 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 TRAV39A0A0B4J263 110 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 A0A0B4J2A0 478 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 C9JVG2 144 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 CLOCKO15516 846 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 SUPT3HO75486 399 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 TSPAN13O95857 204 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 C6orf47O95873 294 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 IGLV2-23P01705 113 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 BGLAPP02818 100 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 ZNF24P17028 368 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 SERPINB5P36952 375 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 ART3Q13508 389 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 CUL2Q13617 745 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 RSPO1Q2MKA7 263 aaPredicted RBP3.16□□□□□ -1.9
LIMA1-205ENST00000550592 ZBED5Q49AG3 693 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 PIGGQ5H8A4 983 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 PRAMEF20Q5VT98 475 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 LRRC66Q68CR7 880 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 LINC00173Q6ZV60 143 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 LIX1Q8N485 282 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 ARIH2OSQ8N7S6 290 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 FBXL13Q8NEE6 735 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 OR4C6Q8NH72 309 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 CXorf40AQ8TE69 158 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 GIMAP1Q8WWP7 306 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 GEMIN6Q8WXD5 167 aaKnown RBP3.16□□□□□ -1.9
LIMA1-205ENST00000550592 SRSF12Q8WXF0 261 aaKnown RBP3.16□□□□□ -1.9
LIMA1-205ENST00000550592 TMEM158Q8WZ71 300 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 FGF20Q9NP95 211 aaPredicted RBP3.16□□□□□ -1.9
LIMA1-205ENST00000550592 SHPKQ9UHJ6 478 aa3.16□□□□□ -1.9
LIMA1-205ENST00000550592 CNTRLQ7Z7A1 2325 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms