RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 IGKV2-28A0A075B6P5 120 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 IGKV2D-24A0A075B6R9 120 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 ZNF816-ZNF321PA0A0X1KG74 233 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 A0A1B0GW55 424 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 MACROD2A1Z1Q3 448 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 CTAGE15A4D2H0 777 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 C17orf51A8MQB3 221 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 H7C0S8 307 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 UGT2B11O75310 529 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 NIPSNAP2O75323 286 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 PSIP1O75475 530 aaKnown RBP2.23□□□□□ -2.05
CNOT2-216ENST00000548939 IGKV2D-28P01615 120 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 CCDC172P0C7W6 258 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 PABPC4LP0CB38 370 aaKnown RBP2.23□□□□□ -2.05
CNOT2-216ENST00000548939 DUX4L2P0CJ85 424 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 DUX4L3P0CJ86 424 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 DUX4L5P0CJ88 424 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 DUX4L6P0CJ89 424 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 DUX4L7P0CJ90 424 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 ZP3P21754 424 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 CPN2P22792 545 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 IGHV1-2P23083 117 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 ME2P23368 584 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 KDELR1P24390 212 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 KRT20P35900 424 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 RPL4P36578 427 aaKnown RBP2.23□□□□□ -2.05
CNOT2-216ENST00000548939 PTGDSP41222 190 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 IER3P46695 156 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 SLC7A2P52569 658 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 CARD18P57730 90 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 HMGCS1Q01581 520 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 BST1Q10588 318 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 CUL1Q13616 776 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 HERPUD1Q15011 391 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 KLF17Q5JT82 389 aaPredicted RBP2.23□□□□□ -2.05
CNOT2-216ENST00000548939 ZNF691Q5VV52 312 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 CASC4Q6P4E1 433 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 DUX4L9Q6RFH8 374 aaPredicted RBP2.23□□□□□ -2.05
CNOT2-216ENST00000548939 BRD3OSQ6XYD6 125 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 BZW1Q7L1Q6 419 aaKnown RBP2.23□□□□□ -2.05
CNOT2-216ENST00000548939 SSX8Q7RTT4 187 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 CTAGE6Q86UF2 777 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 C1orf174Q8IYL3 243 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 GPATCH11Q8N954 259 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 BBOF1Q8ND07 529 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 NEK11Q8NG66 645 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 FBXO30Q8TB52 745 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 ST7LQ8TDW4 575 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 CKAP2Q8WWK9 683 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 RDH5Q92781 318 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 OSTF1Q92882 214 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 SNF8Q96H20 258 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 OLFM3Q96PB7 478 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 GAL3ST1Q99999 423 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 DDX47Q9H0S4 455 aaKnown RBP2.23□□□□□ -2.05
CNOT2-216ENST00000548939 GBA3Q9H227 469 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 GANQ9H2C0 597 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 SPNS1Q9H2V7 528 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 PTGES2Q9H7Z7 377 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 Q9HAA7 133 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 ADGRL4Q9HBW9 690 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 PAQR5Q9NXK6 330 aaPredicted RBP2.23□□□□□ -2.05
CNOT2-216ENST00000548939 DUX4Q9UBX2 424 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 SLC2A6Q9UGQ3 507 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 BCAP29Q9UHQ4 241 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 PDE10AQ9Y233 779 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 FLVCR1Q9Y5Y0 555 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 SLC25A15Q9Y619 301 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 AP4B1Q9Y6B7 739 aa2.23□□□□□ -2.05
CNOT2-216ENST00000548939 HUWE1Q7Z6Z7 4374 aaKnown RBP2.23□□□□□ -2.05
CNOT2-216ENST00000548939 PLECQ15149 4684 aaKnown RBP2.22□□□□□ -2.05
CNOT2-216ENST00000548939 IGHV3-15A0A0B4J1V0 119 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 TRAV40A0A0B4J280 105 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 GOLGA8QA0A0J9YX86 632 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 GOLGA8OA6NCC3 632 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 BTNL10A8MVZ5 291 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 GOLGA8NF8WBI6 632 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 H7C0C1 242 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 GOLGA8RI6L899 631 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 EEDO75530 441 aaKnown RBP2.22□□□□□ -2.05
CNOT2-216ENST00000548939 LY6G6CO95867 125 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 GAS8O95995 478 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 HSP90AA1P07900 732 aaKnown RBP2.22□□□□□ -2.05
CNOT2-216ENST00000548939 TPM2P07951 284 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 SERPINA6P08185 405 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 SMIM10L1P0DMW3 83 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 NPR2P20594 1047 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 IL12BP29460 328 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 ADRA1AP35348 466 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 MAGEA1P43355 309 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 OR3A4PP47883 348 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 ATP5OP48047 213 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 RFX3P48380 749 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 TTPAP49638 278 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 CAPZA1P52907 286 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 TMEM33P57088 247 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 SLC3A1Q07837 685 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 TGM3Q08188 693 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 ZNF154Q13106 437 aa2.22□□□□□ -2.05
CNOT2-216ENST00000548939 GANABQ14697 944 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms