RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TNFRSF4P43489 277 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 CLDN6P56747 220 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 SLC26A5P58743 744 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 C1orf140Q5VVS0 124 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 Q6ZRG5 221 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 PEG10Q86TG7 708 aaKnown RBP20.55■□□□□ 0.88
NPAS3-206ENST00000548645 RAB3CQ96E17 227 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 TUBA4BQ9H853 241 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 TMED7-TICAM2A0A0A6YYA0 188 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 NPIPB7O75200 414 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 IL15RAQ13261 267 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 PCK2Q16822 640 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 Q7L0L9 218 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 KDF1Q8NAX2 398 aaPredicted RBP20.55■□□□□ 0.88
NPAS3-206ENST00000548645 OR13C9Q8NGT0 318 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 LPAR5Q9H1C0 372 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 MIOXQ9UGB7 285 aa20.55■□□□□ 0.88
NPAS3-206ENST00000548645 A8MVM7 634 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 ZNF93P35789 620 aaPredicted RBP20.54■□□□□ 0.88
NPAS3-206ENST00000548645 PMELP40967 661 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 POLR2HP52434 150 aaKnown RBP20.54■□□□□ 0.88
NPAS3-206ENST00000548645 METTL27Q8N6F8 245 aaPredicted RBP20.54■□□□□ 0.88
NPAS3-206ENST00000548645 ZNF248Q8NDW4 579 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 OR5H2Q8NGV7 314 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 SECTM1Q8WVN6 248 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 RTBDNQ9BSG5 229 aaPredicted RBP20.54■□□□□ 0.88
NPAS3-206ENST00000548645 PNO1Q9NRX1 252 aaKnown RBP20.54■□□□□ 0.88
NPAS3-206ENST00000548645 TINAGQ9UJW2 476 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 TO15178 435 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 HKR1P10072 659 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 TMEM268Q5VZI3 342 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 GPBAR1Q8TDU6 330 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 PTPMT1Q8WUK0 201 aaPredicted RBP20.54■□□□□ 0.88
NPAS3-206ENST00000548645 DZANK1Q9NVP4 752 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 C5orf42Q9H799 3197 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 ZNF217O75362 1048 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 TTRP02766 147 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 IL12BP29460 328 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 CSNK1EP49674 416 aaKnown RBP20.54■□□□□ 0.88
NPAS3-206ENST00000548645 TMEM41AQ96HV5 264 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 TAAR9Q96RI9 348 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 OR8D2Q9GZM6 311 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 FBRSQ9HAH7 460 aa20.54■□□□□ 0.88
NPAS3-206ENST00000548645 A6NIZ1 184 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 C17orf51A8MQB3 221 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 SOX1O00570 391 aaPredicted RBP20.53■□□□□ 0.88
NPAS3-206ENST00000548645 WISP1O95388 367 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 AHSA1O95433 338 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 TNFP01375 233 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 HIST1H1DP16402 221 aaKnown RBP20.53■□□□□ 0.88
NPAS3-206ENST00000548645 GLP1RP43220 463 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 RAP1BP61224 184 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 RAP1AP62834 184 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 KLHL24Q6TFL4 600 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 C5orf46Q6UWT4 87 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 GABRG3Q99928 467 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 FAM206AQ9NX38 181 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 GHRLQ9UBU3 117 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 JTBO76095 146 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 OR8U9P0C7N5 309 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 COL9A1P20849 921 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 YPEL5P62699 121 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 OR8U1Q8NH10 309 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 RNF133Q8WVZ7 376 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 GAL3ST4Q96RP7 486 aa20.53■□□□□ 0.88
NPAS3-206ENST00000548645 A0A1W2PPE3 182 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 PRAMEF26H0Y7S4 382 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 GAPDHP04406 335 aaKnown RBP20.52■□□□□ 0.88
NPAS3-206ENST00000548645 ATXN8OSP0DMR3 200 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 HOXB2P14652 356 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 FAM219AQ8IW50 185 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 LYPD6BQ8NI32 183 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 TCTEX1D2Q8WW35 142 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 RGCCQ9H4X1 137 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 C7orf77A4D0Y5 90 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 MPIG6BO95866 241 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 SNRNP70P08621 437 aaKnown RBP20.52■□□□□ 0.88
NPAS3-206ENST00000548645 HOXB5P09067 269 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 ID4P47928 161 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 FMODQ06828 376 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 AWAT1Q58HT5 328 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 PLAC9Q5JTB6 97 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 FBXO17Q96EF6 278 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 TBL1XR1Q9BZK7 514 aa20.52■□□□□ 0.88
NPAS3-206ENST00000548645 A0A0A6YYD4 124 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 FIGNL2A6NMB9 653 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 SFTPBP07988 381 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 HHEXQ03014 270 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 KRBOX4Q5JUW0 171 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 COL13A1Q5TAT6 717 aaPredicted RBP20.51■□□□□ 0.87
NPAS3-206ENST00000548645 ZNF529Q6P280 563 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 GLIPR1L1Q6UWM5 242 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 OCSTAMPQ9BR26 566 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 PBOV1Q9GZY1 135 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 CRISPLD2Q9H0B8 497 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 A0A1W2PQF6 199 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 SOCS1O15524 211 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 HLA-DOBP13765 273 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 AMY2BP19961 511 aa20.51■□□□□ 0.87
NPAS3-206ENST00000548645 RPL12P30050 165 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms