RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 LY6EQ16553 131 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 ZBED5Q49AG3 693 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 TEX36Q5VZQ5 186 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 MRPL21Q7Z2W9 205 aaKnown RBP10.4□□□□□ -0.74
SCAF11-208ENST00000546534 CMTM4Q8IZR5 234 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 FAM156AQ8NDB6 213 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 PRRC1Q96M27 445 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 CCL13Q99616 98 aa10.4□□□□□ -0.74
SCAF11-208ENST00000546534 NMNAT1Q9HAN9 279 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-208ENST00000546534 VSX1Q9NZR4 365 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-208ENST00000546534 LOC100653049A0A140TA62 436 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 hCG_1807616A0A1W2PRN6 198 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 A6NLC8 198 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 F5H5K5 113 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 KRT34O76011 436 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 CD28P10747 220 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 CENPAP49450 140 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 RABL3Q5HYI8 236 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 ZBTB37Q5TC79 503 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 CRIP3Q6Q6R5 217 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 TBPL2Q6SJ96 375 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 PTCHD4Q6ZW05 846 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 CROCCP2Q86T23 111 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 FAM216BQ8N7L0 139 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 BEND2Q8NDZ0 799 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 C17orf50Q8WW18 174 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 RORBQ92753 470 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 CLPTM1LQ96KA5 538 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 WWC2-AS2Q96NR7 200 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 TSSK2Q96PF2 358 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 SSX3Q99909 188 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 RABEP2Q9H5N1 569 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 RANBP3Q9H6Z4 567 aaPredicted RBP10.39□□□□□ -0.75
SCAF11-208ENST00000546534 AURKCQ9UQB9 309 aa10.39□□□□□ -0.75
SCAF11-208ENST00000546534 A0A087WUU8 490 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 MEGF11A6BM72 1044 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 J3KTA2 159 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 DCTN6O00399 190 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 SOCS2O14508 198 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 FBXO24O75426 580 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 PPP1R3DO95685 299 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 IFNA14P01570 189 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 IGLL1P15814 213 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 SDHAP31040 664 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 IFNA8P32881 189 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 MDH1P40925 334 aaKnown RBP10.38□□□□□ -0.75
SCAF11-208ENST00000546534 UBE2E1P51965 193 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 TRAM2Q15035 370 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 PCK2Q16822 640 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 CYBRD1Q53TN4 286 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 WDR38Q5JTN6 314 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 GPR139Q6DWJ6 353 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 NANOGP8Q6NSW7 305 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 CFAP77Q6ZQR2 320 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 NDUFA11Q86Y39 141 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 LINC00346Q8IVM7 164 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 OR4F17Q8NGA8 305 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 ACOT11Q8WXI4 607 aaPredicted RBP10.38□□□□□ -0.75
SCAF11-208ENST00000546534 SEH1LQ96EE3 360 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 TPD52L3Q96J77 140 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 OR4F4Q96R69 305 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 PITX2Q99697 317 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 DCTN5Q9BTE1 182 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 FNDC11Q9BVV2 318 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 NRIP3Q9NQ35 241 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 ADA2Q9NZK5 511 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.38□□□□□ -0.75
SCAF11-208ENST00000546534 PRPF19Q9UMS4 504 aaKnown RBP10.38□□□□□ -0.75
SCAF11-208ENST00000546534 SNX13Q9Y5W8 968 aa10.38□□□□□ -0.75
SCAF11-208ENST00000546534 V9GYY5 206 aaPredicted RBP10.38□□□□□ -0.75
SCAF11-208ENST00000546534 IGLV1-36A0A0B4J1U3 117 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 GGT3PA6NGU5 568 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 ACOT8O14734 319 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 FFAR1O14842 300 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 ANOS1P23352 680 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 GGT2P36268 569 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 CDKN2AP42771 156 aaKnown RBP10.37□□□□□ -0.75
SCAF11-208ENST00000546534 MAGOHP61326 146 aaKnown RBP10.37□□□□□ -0.75
SCAF11-208ENST00000546534 COL7A1Q02388 2944 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 ZNF92Q03936 586 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 ACSM1Q08AH1 577 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 TRAP1Q12931 704 aaKnown RBP10.37□□□□□ -0.75
SCAF11-208ENST00000546534 ECH1Q13011 328 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 IKZF1Q13422 519 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 MICBQ29980 383 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 LRRC23Q53EV4 343 aaPredicted RBP10.37□□□□□ -0.75
SCAF11-208ENST00000546534 DEFB121Q5J5C9 76 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 SLC18B1Q6NT16 456 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 PGM2L1Q6PCE3 622 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 ZNF730Q6ZMV8 503 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 TMPRSS11FQ6ZWK6 438 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 MBOAT2Q6ZWT7 520 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 SLC36A1Q7Z2H8 476 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 ADCK1Q86TW2 530 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 RNF113BQ8IZP6 322 aaKnown RBP10.37□□□□□ -0.75
SCAF11-208ENST00000546534 OFCC1Q8IZS5 231 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 OR51G2Q8NGK0 314 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 OR2AE1Q8NHA4 323 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 C8orf46Q8TAG6 207 aa10.37□□□□□ -0.75
SCAF11-208ENST00000546534 SLC7A13Q8TCU3 470 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms