RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 SLC2A1P11166 492 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 CALCRP30988 508 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 MAP2K3P46734 347 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 TMBIM6P55061 237 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 SRSF1Q07955 248 aaKnown RBP eCLIP13.81□□□□□ -0.22e-15■■■□□ 18.7
PRPF40A-212ENST00000545856 DOC2BQ14184 412 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 MOGQ16653 247 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 SNAI3Q3KNW1 292 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 ZNF718Q3SXZ3 478 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 ADAM5Q6NVV9 412 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 PGAP1Q75T13 922 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 MRPL21Q7Z2W9 205 aaKnown RBP13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 LINC01560Q8TB33 94 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 OR51E1Q8TCB6 317 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 PP6455Q8WZ26 134 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 SGK3Q96BR1 496 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 ZC3HAV1LQ96H79 300 aaKnown RBP13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 TMEM204Q9BSN7 226 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 C1QTNF6Q9BXI9 259 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 NEK6Q9HC98 313 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 BRD7Q9NPI1 651 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 GPR84Q9NQS5 396 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 SSR3Q9UNL2 185 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 DHDHQ9UQ10 334 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 V9GYS6 101 aa13.81□□□□□ -0.2
PRPF40A-212ENST00000545856 GCN1Q92616 2671 aaKnown RBP13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 A0A1B0GTI1 187 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 ZNF879B4DU55 563 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 NOL3O60936 208 aaKnown RBP13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 ALX3O95076 343 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 GABARAPO95166 117 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 OCM2P0CE71 109 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 CCL2P13500 99 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 RANBP1P43487 201 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 EVX1P49640 407 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 SELENOVP59797 346 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 RPS11P62280 158 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 RIPPLY1Q0D2K3 151 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 SNTB2Q13425 540 aaKnown RBP13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 GLYATL3Q5SZD4 288 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 RGS7BPQ6MZT1 257 aaPredicted RBP13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 COMMD2Q86X83 199 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 ZFP41Q8N8Y5 198 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 OR1J1Q8NGS3 322 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 PLPPR2Q96GM1 343 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 FUNDC2Q9BWH2 189 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 FAM192AQ9GZU8 254 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 SLC22A4Q9H015 551 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 PLEKHA1Q9HB21 404 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 ZNF275Q9NSD4 429 aaPredicted RBP13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 CRIM1Q9NZV1 1036 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 ENPP5Q9UJA9 477 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 RALYQ9UKM9 306 aaKnown RBP13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 STARD10Q9Y365 291 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 PKDREJQ9NTG1 2253 aa13.8□□□□□ -0.2
PRPF40A-212ENST00000545856 GPX5O75715 221 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 ZNF250P15622 560 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 FSTP19883 344 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 KITLGP21583 273 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 GCH1P30793 250 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 GK2Q14410 553 aaPredicted RBP13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 SLC22A25Q6T423 547 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 UNQ9370/PRO34162Q6UXP9 181 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 NAA40Q86UY6 237 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 PARP16Q8N5Y8 322 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 SEMA6DQ8NFY4 1073 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 TSEN15Q8WW01 171 aaKnown RBP13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 MARS2Q96GW9 593 aaKnown RBP13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 TMED9Q9BVK6 235 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 ZNF319Q9P2F9 582 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 CKLFQ9UBR5 152 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 GPR160Q9UJ42 338 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 ROS1P08922 2347 aa13.79□□□□□ -0.2
PRPF40A-212ENST00000545856 IGLV3-9A0A075B6K5 115 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 DEFB108AA8MXU0 73 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 PRSS44E7EML9 344 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 ATP6V1G2-DDX39BF2Z307 99 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 P2RY10O00398 339 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 AIREO43918 545 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 TMEM127O75204 238 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 NGFP01138 241 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 UCHL1P09936 223 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 THBS4P35443 961 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 CRYBB2P43320 205 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 GSK3AP49840 483 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 RPS25P62851 125 aaKnown RBP13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 FAM3AP98173 230 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 ZNF92Q03936 586 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 ACSM3Q53FZ2 586 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 ZMAT1Q5H9K5 638 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 MEX3BQ6ZN04 569 aaKnown RBP13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 UTS2BQ765I0 119 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 SATL1Q86VE3 508 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 OR14K1Q8NGZ2 314 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 RGP1Q92546 391 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 PIGTQ969N2 578 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 TMEM106AQ96A25 262 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 HAVCR1Q96D42 359 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 CYSLTR2Q9NS75 346 aa13.78□□□□□ -0.2
PRPF40A-212ENST00000545856 CA10Q9NS85 328 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms