RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 AARDQ4LEZ3 155 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 OTOSQ8NHW6 89 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 ZNF417Q8TAU3 575 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 C15orf40Q8WUR7 153 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 TSEN15Q8WW01 171 aaKnown RBP13.34□□□□□ -0.27
CHFR-223ENST00000544268 DVL3Q92997 716 aaPredicted RBP13.34□□□□□ -0.27
CHFR-223ENST00000544268 HAVCR1Q96D42 359 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 C4orf45Q96LM5 186 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 ZNF75AQ96N20 296 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 CNTNAP3BQ96NU0 1288 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 ZNF587Q96SQ5 575 aaPredicted RBP13.34□□□□□ -0.27
CHFR-223ENST00000544268 EGLN1Q9GZT9 426 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 TMEM138Q9NPI0 162 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 ASF1BQ9NVP2 202 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 MOKQ9UQ07 419 aa13.34□□□□□ -0.27
CHFR-223ENST00000544268 TMED7-TICAM2A0A0A6YYA0 188 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 IGKV1D-43A0A0B4J1Z2 117 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 TRBV11-1A0A0K0K1C0 115 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 ADAM10O14672 748 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 GPR37O15354 613 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 MT-CO3P00414 261 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 JMJD7P0C870 316 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 EIF2S3P41091 472 aaKnown RBP13.33□□□□□ -0.27
CHFR-223ENST00000544268 ZNF813Q6ZN06 617 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 STK35Q8TDR2 534 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 MIB2Q96AX9 1013 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 LIN37Q96GY3 246 aaPredicted RBP13.33□□□□□ -0.27
CHFR-223ENST00000544268 CRLF2Q9HC73 371 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 METTL1Q9UBP6 276 aaKnown RBP13.33□□□□□ -0.27
CHFR-223ENST00000544268 C19orf25Q9UFG5 118 aaPredicted RBP13.33□□□□□ -0.27
CHFR-223ENST00000544268 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 TMED7Q9Y3B3 224 aa13.33□□□□□ -0.27
CHFR-223ENST00000544268 PRSS37A4D1T9 235 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 CASP6P55212 293 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 FBXW4P57775 412 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 SLC26A5P58743 744 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 CHAF1BQ13112 559 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 RAB12Q6IQ22 244 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 LINC00346Q8IVM7 164 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 ZNF471Q9BX82 626 aaPredicted RBP13.33□□□□□ -0.28
CHFR-223ENST00000544268 ZMAT3Q9HA38 289 aaKnown RBP13.33□□□□□ -0.28
CHFR-223ENST00000544268 DMRT1Q9Y5R6 373 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 AHCTF1Q8WYP5 2266 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 RTTNQ86VV8 2226 aa13.33□□□□□ -0.28
CHFR-223ENST00000544268 TRAV36DV7A0A075B6V5 113 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 TRBV5-7A0A0A0MS05 114 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 ALG1L2C9J202 215 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 XKRYO14609 159 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 FGF16O43320 207 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 RBBP9O75884 186 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 F12P00748 615 aaPredicted RBP13.32□□□□□ -0.28
CHFR-223ENST00000544268 PAX6P26367 422 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 CXADRP78310 365 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 ADAM8P78325 824 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 TRIP6Q15654 476 aaKnown RBP13.32□□□□□ -0.28
CHFR-223ENST00000544268 WDSUB1Q8N9V3 476 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 OR51A2Q8NGJ7 313 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 OR1J4Q8NGS1 313 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 TAAR9Q96RI9 348 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 VDAC3Q9Y277 283 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 TMEM127O75204 238 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 ACTL6AO96019 429 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 CD8AP01732 235 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 CYC1P08574 325 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 RAB40ALP0C0E4 278 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 GP1BBP13224 206 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 EDN3P14138 238 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 NFYBP25208 207 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 PNLIPRP2P54317 469 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 CDNFQ49AH0 187 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 ACER2Q5QJU3 275 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 HES3Q5TGS1 186 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 RIF1Q5UIP0 2472 aaKnown RBP13.32□□□□□ -0.28
CHFR-223ENST00000544268 GLT8D1Q68CQ7 371 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 OR10K2Q6IF99 312 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 TIPARPQ7Z3E1 657 aaKnown RBP13.32□□□□□ -0.28
CHFR-223ENST00000544268 PIP4P1Q86T03 277 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 OR8S1Q8NH09 359 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 ZNF519Q8TB69 540 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 RAB40AQ8WXH6 277 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 VRK1Q99986 396 aaPredicted RBP13.32□□□□□ -0.28
CHFR-223ENST00000544268 CGGBP1Q9UFW8 167 aaPredicted RBP13.32□□□□□ -0.28
CHFR-223ENST00000544268 TNFSF18Q9UNG2 199 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 COA3Q9Y2R0 106 aaPredicted RBP13.32□□□□□ -0.28
CHFR-223ENST00000544268 PCDHGA1Q9Y5H4 931 aa13.32□□□□□ -0.28
CHFR-223ENST00000544268 IGLV1-36A0A0B4J1U3 117 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 C9orf172C9J069 976 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 PHYHO14832 338 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 ZNF44P15621 663 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 FOXK1P85037 733 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 SLC17A1Q14916 467 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 PCOLCEQ15113 449 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 INPP5JQ15735 1006 aaPredicted RBP13.31□□□□□ -0.28
CHFR-223ENST00000544268 PCGF3Q3KNV8 242 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 OR2B11Q5JQS5 317 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 TEX30Q5JUR7 227 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 C1orf140Q5VVS0 124 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 DNM1P46Q6ZS02 220 aa13.31□□□□□ -0.28
CHFR-223ENST00000544268 NDUFAF7Q7L592 441 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms