RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PPOXP50336 477 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 MED21Q13503 144 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 CATSPERDQ86XM0 798 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 OR5AS1Q8N127 324 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 ZCCHC24Q8N2G6 241 aaKnown RBP11.64□□□□□ -0.55
SP140-213ENST00000543928 GTF3AQ92664 365 aaKnown RBP11.64□□□□□ -0.55
SP140-213ENST00000543928 MBD6Q96DN6 1003 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 PELI1Q96FA3 418 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 MS4A5Q9H3V2 200 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 RGCCQ9H4X1 137 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 OPA3Q9H6K4 179 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 ZNF701Q9NV72 531 aaPredicted RBP11.64□□□□□ -0.55
SP140-213ENST00000543928 PAK1IP1Q9NWT1 392 aaPredicted RBP11.64□□□□□ -0.55
SP140-213ENST00000543928 CHCHD3Q9NX63 227 aaKnown RBP11.64□□□□□ -0.55
SP140-213ENST00000543928 CLEC2DQ9UHP7 191 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 CCDC168Q8NDH2 2452 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 A0A0U1RQV5 110 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 PLSCR5A0PG75 271 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 GGT3PA6NGU5 568 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 CD300LBA8K4G0 201 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 IQCF6A8MYZ5 107 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 TTRP02766 147 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 MT-ND5P03915 603 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 CDK1P06493 297 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 HTR1AP08908 422 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 CFL1P23528 166 aaKnown RBP11.63□□□□□ -0.55
SP140-213ENST00000543928 CRHBPP24387 322 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 PTH2RP49190 550 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 MMP15P51511 669 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 SLC35A2P78381 396 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 FAM3AP98173 230 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 WDR38Q5JTN6 314 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 OR2G6Q5TZ20 316 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 TMPRSS11AQ6ZMR5 421 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 COMMD2Q86X83 199 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 EGFL6Q8IUX8 553 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 ELMOD2Q8IZ81 293 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 PRSS35Q8N3Z0 413 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 KLHL36Q8N4N3 616 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 BHLHE23Q8NDY6 225 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 SPRYD4Q8WW59 207 aaPredicted RBP11.63□□□□□ -0.55
SP140-213ENST00000543928 SGCDQ92629 289 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 MYDGFQ969H8 173 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 RNF166Q96A37 237 aaPredicted RBP11.63□□□□□ -0.55
SP140-213ENST00000543928 TRMT61AQ96FX7 289 aaKnown RBP11.63□□□□□ -0.55
SP140-213ENST00000543928 PERPQ96FX8 193 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 LYZL4Q96KX0 146 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 SORCS2Q96PQ0 1159 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 TPK1Q9H3S4 243 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 MSL2Q9HCI7 577 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 GPR84Q9NQS5 396 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 CYSLTR2Q9NS75 346 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 CGGBP1Q9UFW8 167 aaPredicted RBP11.63□□□□□ -0.55
SP140-213ENST00000543928 SLC22A13Q9Y226 551 aa11.63□□□□□ -0.55
SP140-213ENST00000543928 CAB39Q9Y376 341 aaPredicted RBP11.63□□□□□ -0.55
SP140-213ENST00000543928 hCG_38984A0A1B0GV85 526 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 ZSCAN5BA6NJL1 495 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 C17orf100A8MU93 164 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 LILRA1O75019 489 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 NDUFS7O75251 213 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 PAX1P15863 534 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 LIPAP38571 399 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 GSK3AP49840 483 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 ZNF81P51508 661 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 ATP5J2P56134 94 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 NANOS3P60323 173 aaKnown RBP11.62□□□□□ -0.55
SP140-213ENST00000543928 ODF4Q2M2E3 257 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 RBM48Q5RL73 367 aaKnown RBP11.62□□□□□ -0.55
SP140-213ENST00000543928 FDX2Q6P4F2 183 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 Q6ZR03 302 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 OR8G5Q8NG78 346 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 OR56B2PQ8NGI1 322 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 OR2G2Q8NGZ5 317 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 OR51E1Q8TCB6 317 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 SOX7Q9BT81 388 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 GSX2Q9BZM3 304 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 RAB1BQ9H0U4 201 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 DUSP21Q9H596 190 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 ERVK-18Q9QC07 812 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 ZNF391Q9UJN7 358 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 BLOC1S6Q9UL45 172 aa11.62□□□□□ -0.55
SP140-213ENST00000543928 E9PI62 339 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 P2RY10O00398 339 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 MYL12BO14950 172 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 SPRY3O43610 288 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 RGS10O43665 173 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 IGLV3-1P01715 115 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 IGHV4-39P01824 125 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 ERCC1P07992 297 aaPredicted RBP11.61□□□□□ -0.55
SP140-213ENST00000543928 KIR3DL2P43630 455 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 GBX2P52951 348 aaPredicted RBP11.61□□□□□ -0.55
SP140-213ENST00000543928 MRPL28Q13084 256 aaKnown RBP11.61□□□□□ -0.55
SP140-213ENST00000543928 OR8B8Q15620 311 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 ZMAT1Q5H9K5 638 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 KLBQ86Z14 1044 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 LRRC75A-AS1Q8N1F1 130 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 OR52N1Q8NH53 320 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 GATAD2BQ8WXI9 593 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms