RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ZNF765Q7L2R6 523 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 SUMF2Q8NBJ7 301 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 HSD17B11Q8NBQ5 300 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 APCDD1LQ8NCL9 501 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 OR8B4Q96RC9 309 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 STACQ99469 402 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 LPAR4Q99677 370 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 RARRES2Q99969 163 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 PTGES2Q9H7Z7 377 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 BCO1Q9HAY6 547 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 RAB18Q9NP72 206 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 MBNL1Q9NR56 388 aaKnown RBP11.31□□□□□ -0.6
SMG8-202ENST00000543872 FANCMQ8IYD8 2048 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 CYB5BO43169 146 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 FKTNO75072 461 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 C8AP07357 584 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 CXCL1P09341 107 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 GIMD1P0DJR0 217 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 GJA4P35212 333 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 ANKRD33Q7Z3H0 272 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 HOGA1Q86XE5 327 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 ZNF101Q8IZC7 436 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 KDM8Q8N371 416 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 OTOSQ8NHW6 89 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 POC1BQ8TC44 478 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 LCN9Q8WX39 176 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 NTNG2Q96CW9 530 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 SPACA7Q96KW9 195 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 NELFAQ9H3P2 528 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 CNTD2Q9H8S5 307 aa11.31□□□□□ -0.6
SMG8-202ENST00000543872 TAAR5O14804 337 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST1H2BKO60814 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 JTBO76095 146 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST1H2BJP06899 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 NPSP0C0P6 89 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST1H2BOP23527 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST1H2BBP33778 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 RGS19P49795 217 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 ADPRHP54922 357 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST1H2BDP58876 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST1H2BCP62807 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST2H2BEQ16778 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 FAM78AQ5JUQ0 283 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.3□□□□□ -0.6
SMG8-202ENST00000543872 TMEM268Q5VZI3 342 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 PNLDC1Q8NA58 520 aaKnown RBP11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST1H2BHQ93079 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 TSPAN32Q96QS1 320 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST1H2BNQ99877 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 HIST1H2BMQ99879 126 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 FAM86C1Q9NVL1 165 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 RCL1Q9Y2P8 373 aaKnown RBP11.3□□□□□ -0.6
SMG8-202ENST00000543872 TGIF2-C20orf24A0A0A6YYL0 155 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 ZNHIT3Q15649 155 aaPredicted RBP11.3□□□□□ -0.6
SMG8-202ENST00000543872 THEM4Q5T1C6 240 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 ERGIC1Q969X5 290 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 COX14Q96I36 57 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 GNRHR2Q96P88 292 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 UBQLN4Q9NRR5 601 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 RAB22AQ9UL26 194 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 GOLT1BQ9Y3E0 138 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 OR5H15A6NDH6 313 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 OR5H1A6NKK0 313 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 BCAT2O15382 392 aaPredicted RBP11.3□□□□□ -0.6
SMG8-202ENST00000543872 TOX3O15405 576 aaPredicted RBP11.3□□□□□ -0.6
SMG8-202ENST00000543872 S1PR1P21453 382 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 C5AR1P21730 350 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 CHATP28329 748 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 ZP2Q05996 745 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 PDGFRLQ15198 375 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 TCEAL5Q5H9L2 206 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 DMRTC1Q5HYR2 192 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 PLPP4Q5VZY2 271 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 NPSR1Q6W5P4 371 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 SFTPA1Q8IWL2 248 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 ZNF248Q8NDW4 579 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 FAM213BQ8TBF2 198 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 CDCA3Q99618 268 aaPredicted RBP11.3□□□□□ -0.6
SMG8-202ENST00000543872 NICN1Q9BSH3 213 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 ST6GALNAC5Q9BVH7 336 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 TMEM184BQ9Y519 407 aaPredicted RBP11.3□□□□□ -0.6
SMG8-202ENST00000543872 COLEC10Q9Y6Z7 277 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 C5orf42Q9H799 3197 aa11.3□□□□□ -0.6
SMG8-202ENST00000543872 IGKV1D-42A0A075B6H8 117 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 HRKO00198 91 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 P2RY10O00398 339 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 XKRYO14609 159 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 SLC16A7O60669 478 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 GPR75O95800 540 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 RNH1P13489 461 aaKnown RBP11.29□□□□□ -0.6
SMG8-202ENST00000543872 ZNF708P17019 499 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 IGFALSP35858 605 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 PPP1CCP36873 323 aaKnown RBP11.29□□□□□ -0.6
SMG8-202ENST00000543872 UBE2KP61086 200 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 RAB1AP62820 205 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 PSG6Q00889 435 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 NFATC4Q14934 902 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 PRICKLE4Q2TBC4 344 aa11.29□□□□□ -0.6
SMG8-202ENST00000543872 RTL10Q7L3V2 364 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms