RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PLSCR3Q9NRY6 295 aa12.41□□□□□ -0.42
LDB3-207ENST00000542786 SPAARA0A1B0GVQ0 90 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 FAM166BA8MTA8 275 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 F5H5K5 113 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 SMLR1H3BR10 107 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 M0R135 149 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ARPC1BO15143 372 aaKnown RBP12.4□□□□□ -0.42
LDB3-207ENST00000542786 LRP3O75074 770 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ALX3O95076 343 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 SP1P08047 785 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 MELTFP08582 738 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ERP29P30040 261 aaKnown RBP12.4□□□□□ -0.42
LDB3-207ENST00000542786 ZNF93P35789 620 aaPredicted RBP12.4□□□□□ -0.42
LDB3-207ENST00000542786 RAD52P43351 418 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 FAPQ12884 760 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 TNK1Q13470 666 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 TGIF1Q15583 401 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 LAMTOR1Q6IAA8 161 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 SLC25A25Q6KCM7 469 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 Q6ZTK2 550 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ZNF627Q7L945 461 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 OR2W3Q7Z3T1 314 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 BEST4Q8NFU0 473 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 FGFBP3Q8TAT2 258 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ZFAND1Q8TCF1 268 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ZNF799Q96GE5 643 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 MED30Q96HR3 178 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 NOX3Q9HBY0 568 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ASCL3Q9NQ33 180 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 PAQR5Q9NXK6 330 aaPredicted RBP12.4□□□□□ -0.42
LDB3-207ENST00000542786 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 PLEK2Q9NYT0 353 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ZNF107Q9UII5 783 aaPredicted RBP12.4□□□□□ -0.42
LDB3-207ENST00000542786 KLK13Q9UKR3 277 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 NPTNQ9Y639 398 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 MEIKINA0A087WXM9 373 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 A0A0A6YYD4 124 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 MEIS3P1A6NDR6 274 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 SGCEO43556 437 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 DHRS3O75911 302 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 IL5P05113 134 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 AKAIN1P0CW23 69 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 B4GALT1P15291 398 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 THBS4P35443 961 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 OR3A4PP47883 348 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 RSPO4Q2I0M5 234 aaPredicted RBP12.4□□□□□ -0.42
LDB3-207ENST00000542786 CEACAM16Q2WEN9 425 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 SNAI3Q3KNW1 292 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 PDSS1Q5T2R2 415 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 RAB12Q6IQ22 244 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ZNF774Q6NX45 483 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 SLC36A1Q7Z2H8 476 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 COMMD2Q86X83 199 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 GABRG1Q8N1C3 465 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 IL22RA1Q8N6P7 574 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ZFP62Q8NB50 900 aaPredicted RBP12.4□□□□□ -0.42
LDB3-207ENST00000542786 TMEM229BQ8NBD8 167 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 ACBD4Q8NC06 268 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 OR1F12Q8NHA8 337 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 PHF21AQ96BD5 680 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 CMBLQ96DG6 245 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 SPACA5Q96QH8 159 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 GAL3ST1Q99999 423 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 WNT5BQ9H1J7 359 aa12.4□□□□□ -0.42
LDB3-207ENST00000542786 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
LDB3-207ENST00000542786 FAM172BPA6NC97 362 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 APOC1P02654 83 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 CD74P04233 296 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 CD3DP04234 171 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 VSIG10L2P0DP72 767 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 GTF2F2P13984 249 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 ZNF32P17041 273 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 MEOX1P50221 254 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 ACTBP60709 375 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 ACTG1P63261 375 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 MRPS15P82914 257 aaKnown RBP12.39□□□□□ -0.43
LDB3-207ENST00000542786 ECH1Q13011 328 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 BCL2A1Q16548 175 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 GFOD2Q3B7J2 385 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 DRAM2Q6UX65 266 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 GLDNQ6ZMI3 551 aaPredicted RBP12.39□□□□□ -0.43
LDB3-207ENST00000542786 GALNTL5Q7Z4T8 443 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 RTN4RL2Q86UN3 420 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 ANGPTL5Q86XS5 388 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 CCDC54Q8NEL0 328 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 ITFG2Q969R8 447 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 SPTSSAQ969W0 71 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 FAM46BQ96A09 425 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 SGK3Q96BR1 496 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 FOXB1Q99853 325 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 LINC00470Q9BZP3 86 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 LPAR5Q9H1C0 372 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 SLCO5A1Q9H2Y9 848 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 BEX1Q9HBH7 125 aa12.39□□□□□ -0.43
LDB3-207ENST00000542786 MRPS28Q9Y2Q9 187 aaKnown RBP12.39□□□□□ -0.43
LDB3-207ENST00000542786 KLF13Q9Y2Y9 288 aaPredicted RBP12.39□□□□□ -0.43
LDB3-207ENST00000542786 TMEM235A6NFC5 223 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 PYCARD-AS1I3L0S3 204 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 ITGB2P05107 769 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms