RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 C16orf97H3BN30 126 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 ADRA2CP18825 462 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 IL32P24001 234 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 ARR3P36575 388 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 RAB1AP62820 205 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 GFOD2Q3B7J2 385 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 TBRG1Q3YBR2 411 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 FBXL19-AS1Q494R0 122 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 BHLHA15Q7RTS1 189 aaPredicted RBP24.11■■□□□ 1.45
CCM2-218ENST00000541586 LAX1Q8IWV1 398 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 ZNF275Q9NSD4 429 aaPredicted RBP24.11■■□□□ 1.45
CCM2-218ENST00000541586 CMAHPQ9Y471 501 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 TENM4Q6N022 2769 aa24.11■■□□□ 1.45
CCM2-218ENST00000541586 RTTNQ86VV8 2226 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 UBL3O95164 117 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 EPXP11678 715 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 COX5AP20674 150 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 CCL1P22362 96 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 THBS2P35442 1172 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 ZNF846Q147U1 533 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 TMEM53Q6P2H8 277 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 DPPA2Q7Z7J5 298 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 SOX7Q9BT81 388 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 ABCB9Q9NP78 766 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 COMMD3Q9UBI1 195 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 A0A0U1RQV5 110 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 TBX1O43435 398 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 IGLV3-1P01715 115 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 MAS1P04201 325 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 SLC2A2P11168 524 aaPredicted RBP24.1■■□□□ 1.45
CCM2-218ENST00000541586 SNAI3Q3KNW1 292 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 ACOT12Q8WYK0 555 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 FGGYQ96C11 551 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 KCTD12Q96CX2 325 aaKnown RBP24.1■■□□□ 1.45
CCM2-218ENST00000541586 WDR12Q9GZL7 423 aaKnown RBP24.1■■□□□ 1.45
CCM2-218ENST00000541586 MIXL1Q9H2W2 232 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 B3GNT2Q9NY97 397 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 TAS2R4Q9NYW5 299 aa24.1■■□□□ 1.45
CCM2-218ENST00000541586 ATF1P18846 271 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 FSTP19883 344 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 PSMB1P20618 241 aaKnown RBP24.09■■□□□ 1.45
CCM2-218ENST00000541586 APEX1P27695 318 aaKnown RBP24.09■■□□□ 1.45
CCM2-218ENST00000541586 TNFSF8P32971 234 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 DDI2Q5TDH0 399 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 ALKBH2Q6NS38 261 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 OR52H1Q8NGJ2 320 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 NANOS1Q8WY41 292 aaKnown RBP24.09■■□□□ 1.45
CCM2-218ENST00000541586 LYZL4Q96KX0 146 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 CEP19Q96LK0 163 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 CKLFQ9UBR5 152 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 FOXJ3Q9UPW0 622 aa24.09■■□□□ 1.45
CCM2-218ENST00000541586 FASNP49327 2511 aaKnown RBP24.09■■□□□ 1.45
CCM2-218ENST00000541586 C19orf84I3L1E1 186 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 J3QRK9 145 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 COX5BP10606 129 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 MZT2AQ6P582 158 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 DOK3Q7L591 496 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 CCDC190Q86UF4 302 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 OR1J2Q8NGS2 313 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 S100PBPQ96BU1 408 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 FAM71F1Q96KD3 344 aaPredicted RBP24.08■■□□□ 1.45
CCM2-218ENST00000541586 ACTR6Q9GZN1 396 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 OR10A2Q9H208 303 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 NPDC1Q9NQX5 325 aaPredicted RBP24.08■■□□□ 1.45
CCM2-218ENST00000541586 V9GY05 133 aa24.08■■□□□ 1.45
CCM2-218ENST00000541586 LOC100509620A0A075B734 347 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 A0A1W2PR80 420 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 PRSS44E7EML9 344 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 LCATP04180 440 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 IGFBP3P17936 291 aaPredicted RBP24.07■■□□□ 1.44
CCM2-218ENST00000541586 GABRA6Q16445 453 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 GSG1Q2KHT4 349 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 PARP16Q8N5Y8 322 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 DNAAF1Q8NEP3 725 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 ADAT3Q96EY9 351 aaPredicted RBP24.07■■□□□ 1.44
CCM2-218ENST00000541586 WDFY2Q96P53 400 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 PLGRKTQ9HBL7 147 aa24.07■■□□□ 1.44
CCM2-218ENST00000541586 A6NIN4 97 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 ANXA2P2A6NMY6 339 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 IFITM5A6NNB3 132 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 STOMP27105 288 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 CCKARP32238 428 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 ETV6P41212 452 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 PLP2Q04941 152 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 DYNC1I2Q13409 638 aaKnown RBP24.06■■□□□ 1.44
CCM2-218ENST00000541586 DCTN2Q13561 401 aaKnown RBP24.06■■□□□ 1.44
CCM2-218ENST00000541586 ZNF584Q8IVC4 421 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 PLPP7Q8NBV4 271 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 STEAP2Q8NFT2 490 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 LINC01560Q8TB33 94 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 SP140LQ9H930 580 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 DOPEY1Q5JWR5 2465 aa24.06■■□□□ 1.44
CCM2-218ENST00000541586 AIPO00170 330 aa24.05■■□□□ 1.44
CCM2-218ENST00000541586 HPGDSO60760 199 aa24.05■■□□□ 1.44
CCM2-218ENST00000541586 CLDN1O95832 211 aa24.05■■□□□ 1.44
CCM2-218ENST00000541586 PPP3R1P63098 170 aa24.05■■□□□ 1.44
CCM2-218ENST00000541586 MDP1Q86V88 176 aa24.05■■□□□ 1.44
CCM2-218ENST00000541586 SERPINA12Q8IW75 414 aa24.05■■□□□ 1.44
CCM2-218ENST00000541586 CCDC36Q8IYA8 594 aa24.05■■□□□ 1.44
CCM2-218ENST00000541586 BORCS5Q969J3 196 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms