RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 ZNF208O43345 1280 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 SCGB1D2O95969 90 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 ICAM2P13598 275 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 GLRA1P23415 457 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 ID4P47928 161 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 DAP3P51398 398 aaKnown RBP12.5□□□□□ -0.41
INO80E-203ENST00000540562 SNU13P55769 128 aaKnown RBP12.5□□□□□ -0.41
INO80E-203ENST00000540562 C17orf67Q0P5P2 114 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 ANKRD37Q7Z713 158 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 PNLDC1Q8NA58 520 aaKnown RBP12.5□□□□□ -0.41
INO80E-203ENST00000540562 OR5D14Q8NGL3 314 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 DDIT4LQ96D03 193 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 RAB3CQ96E17 227 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 UCN2Q96RP3 112 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 PHB2Q99623 299 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 B3GAT1Q9P2W7 334 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 CFAP47Q6ZTR5 3102 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 BLACEA4D250 179 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 BCAT2O15382 392 aaPredicted RBP12.5□□□□□ -0.41
INO80E-203ENST00000540562 ZNF43P17038 809 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 CX3CR1P49238 355 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 DCAF7P61962 342 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 DNM1P34Q6PK57 102 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 CBLN2Q8IUK8 224 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 OR51T1Q8NGJ9 327 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 RRNAD1Q96FB5 475 aaKnown RBP12.5□□□□□ -0.41
INO80E-203ENST00000540562 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 MTCH2Q9Y6C9 303 aa12.5□□□□□ -0.41
INO80E-203ENST00000540562 LIPT2A6NK58 231 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 STMND1H3BQB6 276 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 FBXO24O75426 580 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 IGHV3-9P01782 118 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 CASRP41180 1078 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 AKR1C3P42330 323 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 DHODHQ02127 395 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 LYG2Q86SG7 212 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 D2HGDHQ8N465 521 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 RNF133Q8WVZ7 376 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 ZNF837Q96EG3 531 aaPredicted RBP12.49□□□□□ -0.41
INO80E-203ENST00000540562 SLC25A21Q9BQT8 299 aaPredicted RBP12.49□□□□□ -0.41
INO80E-203ENST00000540562 UTP23Q9BRU9 249 aaKnown RBP12.49□□□□□ -0.41
INO80E-203ENST00000540562 CHMP1AQ9HD42 196 aaPredicted RBP12.49□□□□□ -0.41
INO80E-203ENST00000540562 OR6C76A6NM76 312 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 ZNF705EA8MWA4 302 aaPredicted RBP12.49□□□□□ -0.41
INO80E-203ENST00000540562 ZNF878C9JN71 531 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 SRSF10O75494 262 aaKnown RBP12.49□□□□□ -0.41
INO80E-203ENST00000540562 FARS2O95363 451 aaKnown RBP12.49□□□□□ -0.41
INO80E-203ENST00000540562 HPP00738 406 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 NAGAP17050 411 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 SMAD4Q13485 552 aaKnown RBP12.49□□□□□ -0.41
INO80E-203ENST00000540562 GUCA2BQ16661 112 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 TMEM71Q6P5X7 295 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 DNM1P46Q6ZS02 220 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 SLC22A24Q8N4F4 322 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 OR4K17Q8NGC6 315 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 TMEM59Q9BXS4 323 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 SVILO95425 2214 aa12.49□□□□□ -0.41
INO80E-203ENST00000540562 ZNF726A6NNF4 738 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 TRIM77I1YAP6 450 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 UBCP0CG48 685 aaKnown RBP12.48□□□□□ -0.41
INO80E-203ENST00000540562 RPA2P15927 270 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 AMY2BP19961 511 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 ZBTB25P24278 435 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 RAET1LQ5VY80 246 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 HDDC2Q7Z4H3 204 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 OR6K3Q8NGY3 331 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 FOXRED1Q96CU9 486 aaPredicted RBP12.48□□□□□ -0.41
INO80E-203ENST00000540562 SHARPINQ9H0F6 387 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 SDHAF3Q9NRP4 125 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 CYB5R1Q9UHQ9 305 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 RAB22AQ9UL26 194 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 FREM1Q5H8C1 2179 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 TMEM200CA6NKL6 621 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 SULT2B1O00204 365 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 FGF2P09038 288 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 OPRM1P35372 400 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 OR3A2P47893 321 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 CSNK2A1P68400 391 aaPredicted RBP12.48□□□□□ -0.41
INO80E-203ENST00000540562 GABREP78334 506 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 ZNF273Q14593 569 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 PLEKHN1Q494U1 663 aaPredicted RBP12.48□□□□□ -0.41
INO80E-203ENST00000540562 CSNK2A3Q8NEV1 391 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 OR52H1Q8NGJ2 320 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 AQP3Q92482 292 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 PRRT1Q99946 306 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 ZNF416Q9BWM5 594 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 OR5AC2Q9NZP5 309 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 A8MXK9 166 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 RRADP55042 308 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 SNTB1Q13884 538 aaKnown RBP12.48□□□□□ -0.41
INO80E-203ENST00000540562 COL13A1Q5TAT6 717 aaPredicted RBP12.48□□□□□ -0.41
INO80E-203ENST00000540562 FDX2Q6P4F2 183 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 DRAM2Q6UX65 266 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 C6orf201Q7Z4U5 140 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 TMEM17Q86X19 198 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 POC1BQ8TC44 478 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 TOMM40LQ969M1 308 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 PGAM5Q96HS1 289 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 CCNL2Q96S94 520 aaPredicted RBP12.48□□□□□ -0.41
INO80E-203ENST00000540562 TSNAXQ99598 290 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms