RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 WDR1O75083 606 aa5.49□□□□□ -1.53
PTPRD-214ENST00000540109 EN2P19622 333 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-214ENST00000540109 HIST1H1TP22492 207 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-214ENST00000540109 CCKBRP32239 447 aa5.49□□□□□ -1.53
PTPRD-214ENST00000540109 FXYD4P59646 89 aa5.49□□□□□ -1.53
PTPRD-214ENST00000540109 ATP6V1FQ16864 119 aa5.49□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF385BQ569K4 471 aa5.49□□□□□ -1.53
PTPRD-214ENST00000540109 MEX3BQ6ZN04 569 aaKnown RBP5.49□□□□□ -1.53
PTPRD-214ENST00000540109 LILRA3Q8N6C8 439 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-214ENST00000540109 NHLRC2Q8NBF2 726 aa5.49□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM190Q8WZ59 177 aa5.49□□□□□ -1.53
PTPRD-214ENST00000540109 KCNIP1Q9NZI2 227 aa5.49□□□□□ -1.53
PTPRD-214ENST00000540109 PRSS38A1L453 326 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 FIGNL2A6NMB9 653 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 RAB27BO00194 218 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 DVL1O14640 695 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TNFSF14O43557 240 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 GAPDHP04406 335 aaKnown RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 H2AFB1P0C5Y9 115 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF28P17035 718 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 PGCP20142 388 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 PMCHP20382 165 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF133P52736 654 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 PNLIPRP3Q17RR3 467 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 AMZ1Q400G9 498 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 PLA1AQ53H76 456 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 CARD17Q5XLA6 110 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 DHRS7BQ6IAN0 325 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF343Q6P1L6 599 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 BTNL8Q6UX41 500 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 Q6ZTK2 550 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF100Q8IYN0 542 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM229BQ8NBD8 167 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ZCCHC14Q8WYQ9 949 aaKnown RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ZMYND19Q96E35 227 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 AMDHD1Q96NU7 426 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 MYADMQ96S97 322 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 LYRM4Q9HD34 91 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 RAB18Q9NP72 206 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3DA0A087WVF3 549 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3IA0A087WXS9 549 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TRBV4-1A0A0J9YWV2 114 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 A0A1B0GW15 77 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 C7orf77A4D0Y5 90 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 A8MVM7 634 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 CDRT15L2A8MXV6 281 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3LB9A6J9 549 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 PDGFBP01127 241 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 GYPBP06028 91 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 NMBP08949 121 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3HP0C7X1 549 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 EPHA1P21709 976 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 DHODHQ02127 395 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 HYAL1Q12794 435 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 GSG1Q2KHT4 349 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM196Q5HYL7 178 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3CQ6IPX1 549 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 C11orf87Q6NUJ2 197 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ABHD17CQ6PCB6 329 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ABHD12BQ7Z5M8 362 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 DND1Q8IYX4 353 aaKnown RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3Q8IZP1 549 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 BEND2Q8NDZ0 799 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 OR52E1Q8NGJ3 308 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 OR2A1Q8NGT9 310 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 C2orf50Q96LR7 162 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ANGPTL4Q9BY76 406 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 IGFLR1Q9H665 355 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 EGLN3Q9H6Z9 239 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 STEAP1Q9UHE8 339 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 YBX2Q9Y2T7 364 aaKnown RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 V9GYH0 126 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 MED19A0JLT2 244 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 SLC17A3O00476 420 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 LRP3O75074 770 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 LIMS1P48059 325 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 SIRPAP78324 504 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 FABP5Q01469 135 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 TRMT12Q53H54 448 aaKnown RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 FJX1Q86VR8 437 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 GPR137CQ8N3F9 429 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ABHD4Q8TB40 342 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 RGP1Q92546 391 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 FGGYQ96C11 551 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 REEP6Q96HR9 211 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 FAM210BQ96KR6 192 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 PMCHL2Q9BQD1 86 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF286AQ9HBT8 521 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 NDOR1Q9UHB4 597 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 MRPS28Q9Y2Q9 187 aaKnown RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 MYO10Q9HD67 2058 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 SLC22A20A6NK97 555 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF814B7Z6K7 855 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 MASP2O00187 686 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 SURF4O15260 269 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 IGLV3-19P01714 112 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 STATHP02808 62 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 FGF2P09038 288 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 FOLR2P14207 255 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 CDX1P47902 265 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms