RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 DVL2O14641 736 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 NCR1O76036 304 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 EIF4EP06730 217 aaKnown RBP7.81□□□□□ -1.16
DDB1-213ENST00000539332 CXCL3P19876 107 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 POU3F2P20265 443 aaPredicted RBP7.81□□□□□ -1.16
DDB1-213ENST00000539332 GIFP27352 417 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 MAPK3P27361 379 aaPredicted RBP7.81□□□□□ -1.16
DDB1-213ENST00000539332 STARP49675 285 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 CLDN18P56856 261 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 NANOS3P60323 173 aaKnown RBP7.81□□□□□ -1.16
DDB1-213ENST00000539332 SCRN3Q0VDG4 424 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 BTN1A1Q13410 526 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 INSL4Q14641 139 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 ODF1Q14990 250 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 PLEKHN1Q494U1 663 aaPredicted RBP7.81□□□□□ -1.16
DDB1-213ENST00000539332 LIPNQ5VXI9 398 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 SHEQ5VZ18 495 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 RGS7BPQ6MZT1 257 aaPredicted RBP7.81□□□□□ -1.16
DDB1-213ENST00000539332 SLC18B1Q6NT16 456 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 SFXN4Q6P4A7 337 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 NLRC3Q7RTR2 1065 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 FAM220AQ7Z4H9 259 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 ZNF679Q8IYX0 411 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 ST7LQ8TDW4 575 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 SCARB1Q8WTV0 552 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 PHYHIPQ92561 330 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 GHSRQ92847 366 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 TMEM54Q969K7 222 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 DACT3Q96B18 629 aaPredicted RBP7.81□□□□□ -1.16
DDB1-213ENST00000539332 WBP1Q96G27 269 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 ABHD6Q9BV23 337 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 DEFB127Q9H1M4 99 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 PLEKHA1Q9HB21 404 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 GPN1Q9HCN4 374 aaPredicted RBP7.81□□□□□ -1.16
DDB1-213ENST00000539332 CYB5R1Q9UHQ9 305 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 TUBD1Q9UJT1 453 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 LHX6Q9UPM6 363 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 RCE1Q9Y256 329 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 PRELID3BQ9Y3B1 194 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 KLF2Q9Y5W3 355 aaPredicted RBP7.81□□□□□ -1.16
DDB1-213ENST00000539332 LIPGQ9Y5X9 500 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 FLVCR1Q9Y5Y0 555 aa7.81□□□□□ -1.16
DDB1-213ENST00000539332 IGKV3D-15A0A087WSY6 115 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 TRBV2A0A0J9YWF9 115 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 CD8B2A6NJW9 211 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 L7N2F9 121 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 CYTIPO60759 359 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 SRSF10O75494 262 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 RP2O75695 350 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 GATBO75879 557 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 RGS11O94810 467 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 MPZL1O95297 269 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 WNT11O96014 354 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 SERPINA3P01011 423 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 FGF2P09038 288 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 UCHL1P09936 223 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 CD8BP10966 210 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 ZNF708P17019 499 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 EDNRAP25101 427 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 LAP3P28838 519 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 THBS2P35442 1172 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 RPS27P42677 84 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 CBX5P45973 191 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 CLDN17P56750 224 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 CLRN1P58418 232 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 ADAM8P78325 824 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 MRPS10P82664 201 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 SLC3A1Q07837 685 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 SNTB2Q13425 540 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 MADCAM1Q13477 382 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 ALKBH1Q13686 389 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 MEP1BQ16820 701 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 ST3GAL2Q16842 350 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 RPUSD3Q6P087 351 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 LRFN4Q6PJG9 635 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 DEGS2Q6QHC5 323 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 SEZ6L2Q6UXD5 910 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 CHMP1BQ7LBR1 199 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 SIAH3Q8IW03 269 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 OR52H1Q8NGJ2 320 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 OR2G2Q8NGZ5 317 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 OR52N5Q8NH56 324 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 OR10D3Q8NH80 312 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 ABHD4Q8TB40 342 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 TRMT10AQ8TBZ6 339 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 RNF128Q8TEB7 428 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 C15orf40Q8WUR7 153 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 RGP1Q92546 391 aaPredicted RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 YIPF5Q969M3 257 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 MCHR2Q969V1 340 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 CPNE4Q96A23 557 aaPredicted RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 INTS12Q96CB8 462 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 C4orf45Q96LM5 186 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 ZNF385AQ96PM9 386 aaKnown RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 PRORYQ9H606 182 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 ING1Q9UK53 422 aaPredicted RBP7.8□□□□□ -1.16
DDB1-213ENST00000539332 COL6A6A6NMZ7 2263 aa7.8□□□□□ -1.16
DDB1-213ENST00000539332 TRGV5A0A0B4J1U4 118 aa7.79□□□□□ -1.16
DDB1-213ENST00000539332 IGHV3-15A0A0B4J1V0 119 aa7.79□□□□□ -1.16
DDB1-213ENST00000539332 TRAV1-2A0A0B4J238 106 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms