RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 H2BFWTQ7Z2G1 175 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 ARL6IP6Q8N6S5 226 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 ATG101Q9BSB4 218 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 DNAJB11Q9UBS4 358 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 LHX6Q9UPM6 363 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 A0A1W2PRU2 124 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 TEAD1P28347 426 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 CLDN2P57739 230 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 HTRA3P83110 453 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 TPBGQ13641 420 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 NR0B2Q15466 257 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 RPEL1Q2QD12 228 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 DND1Q8IYX4 353 aaKnown RBP5.17□□□□□ -1.58
CSMD1-215ENST00000537824 SPICQ8N5J4 248 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 OR2A1Q8NGT9 310 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 OR2AE1Q8NHA4 323 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 TRAPPC2LQ9UL33 140 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 DUXBA0A1W2PPF3 345 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 ADAM11O75078 769 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 ADAMTS4O75173 837 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 DHODHQ02127 395 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 ELOBQ15370 118 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 TMEM184AQ6ZMB5 413 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 TBX15Q96SF7 602 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 ADAT1Q9BUB4 502 aaKnown RBP5.17□□□□□ -1.58
CSMD1-215ENST00000537824 PLEKHF2Q9H8W4 249 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 RAB9BQ9NP90 201 aa5.17□□□□□ -1.58
CSMD1-215ENST00000537824 TNFRSF10CO14798 259 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 OR7C2O60412 319 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 WNT7BP56706 349 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 STPG2Q8N412 459 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 TMEM38AQ9H6F2 299 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 B4GALT7Q9UBV7 327 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 FBXL17Q9UF56 701 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 TOPAZ1Q8N9V7 1692 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 LRP6O75581 1613 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 FN1P02751 2386 aaKnown RBP5.16□□□□□ -1.58
CSMD1-215ENST00000537824 H3BVH4 76 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 SEMA7AO75326 666 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 SLC6A1P30531 599 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 APLNRP35414 380 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CLDN10P78369 228 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 ZNF628Q5EBL2 1059 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 SIRT6Q8N6T7 355 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 TMEM255BQ8WV15 326 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.16□□□□□ -1.58
CSMD1-215ENST00000537824 PITPNC1Q9UKF7 332 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 HELTA6NFD8 242 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 GJE1A6NN92 205 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 SULT2B1O00204 365 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 ZNF195O14628 629 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CST4P01036 141 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 ZNF17P17021 662 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 UBE2G1P62253 170 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 UBE2V2Q15819 145 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 ZNF362Q5T0B9 420 aaPredicted RBP5.16□□□□□ -1.58
CSMD1-215ENST00000537824 C9orf131Q5VYM1 1079 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 GHITMQ9H3K2 345 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 SERTAD3Q9UJW9 196 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 PPT2Q9UMR5 302 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 PPP1R3CQ9UQK1 317 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 FXYD1O00168 92 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 F12P00748 615 aaPredicted RBP5.16□□□□□ -1.58
CSMD1-215ENST00000537824 SEMG1P04279 462 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 LIMS3P0CW19 117 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 LIMS4P0CW20 117 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CT45A6P0DMU7 189 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CT45A5P0DMU8 189 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CT45A7P0DMV0 189 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CT45A8P0DMV1 189 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CT45A9P0DMV2 189 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 PCBD1P61457 104 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CT45A2Q5DJT8 189 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CT45A1Q5HYN5 189 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 OR10A7Q8NGE5 316 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CT45A3Q8NHU0 189 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 UBTD2Q8WUN7 234 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 GPA33Q99795 319 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 WNT6Q9Y6F9 365 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 A0A1B0GV72 72 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 SLC5A10A0PJK1 596 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CT45A10P0DMU9 189 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 LAG3P18627 525 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 ATF1P18846 271 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CHRNB4P30926 498 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 GPM6AP51674 278 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 LRRTM3Q86VH5 581 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 GPR32P1Q8NGA4 272 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 ASB11Q8WXH4 323 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 FBXO4Q9UKT5 387 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 AMDHD2Q9Y303 409 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 LOC285556D6RIA3 1793 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 TRAV1-2A0A0B4J238 106 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 ST8SIA5O15466 376 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 VEGFDO43915 354 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CTNSO60931 367 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 CSF2RAP15509 400 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 VWA2Q5GFL6 755 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 FAHD1Q6P587 224 aa5.16□□□□□ -1.58
CSMD1-215ENST00000537824 SLC39A11Q8N1S5 342 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms