RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 MARVELD3Q96A59 401 aa6.35□□□□□ -1.39
CTNND1-236ENST00000533667 THOC3Q96J01 351 aaKnown RBP6.35□□□□□ -1.39
CTNND1-236ENST00000533667 NOL4LQ96MY1 436 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-236ENST00000533667 WFIKKN1Q96NZ8 548 aa6.35□□□□□ -1.39
CTNND1-236ENST00000533667 SUCNR1Q9BXA5 334 aa6.35□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF391Q9UJN7 358 aa6.35□□□□□ -1.39
CTNND1-236ENST00000533667 B9D1Q9UPM9 204 aa6.35□□□□□ -1.39
CTNND1-236ENST00000533667 OSGIN2Q9Y236 505 aa6.35□□□□□ -1.39
CTNND1-236ENST00000533667 A0A1W2PPC4 97 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 GRPP07492 148 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 GUSBP08236 651 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 MGST1P10620 155 aaKnown RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 COX5AP20674 150 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 GPR3P46089 330 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 CLN3Q13286 438 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 ADAM5Q6NVV9 412 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 RPUSD3Q6P087 351 aaKnown RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 CD300LDQ6UXZ3 194 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 OR2W3Q7Z3T1 314 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 FAM58AQ8N1B3 248 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 ZDHHC22Q8N966 263 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 ZPBPQ9BS86 351 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 EDEM2Q9BV94 578 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 PHF7Q9BWX1 381 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 R3HDMLQ9H3Y0 253 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 IL21Q9HBE4 155 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 A0A087WUJ7 227 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 A0A1W2PPQ1 181 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 SLC31A2O15432 143 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF354AO60765 605 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 AQP8O94778 261 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 ZIC2O95409 532 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 PDGFBP01127 241 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 OR10J4P0C629 311 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 CD37P11049 281 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 PGFP49763 221 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 FABP6P51161 128 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 RUNX2Q13950 521 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 RTL8BQ17RB0 113 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 OR5M8Q8NGP6 311 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 EDARADDQ8WWZ3 215 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 SARAFQ96BY9 339 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 WDR34Q96EX3 536 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 TAAR6Q96RI8 345 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 SOX7Q9BT81 388 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 FN3KRPQ9HA64 309 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 TMEFF2Q9UIK5 374 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 A4GNTQ9UNA3 340 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 EXOGQ9Y2C4 368 aaKnown RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 DDX60LQ5H9U9 1706 aaKnown RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 DHHO43323 396 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 PEX11BO96011 259 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 RD3LP0DJH9 198 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 APEHP13798 732 aaKnown RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 CD80P33681 288 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 HRH1P35367 487 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 CSN1S1P47710 185 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 GPR12P47775 334 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 FUT6P51993 359 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 OR10A3P58181 314 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 CDK5Q00535 292 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 EDDM3AQ14507 147 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 IQCJQ1A5X6 159 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 TMEM128Q5BJH2 165 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 ELFN2Q5R3F8 820 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 TMEM268Q5VZI3 342 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 H1FXQ92522 213 aaKnown RBP6.34□□□□□ -1.39
CTNND1-236ENST00000533667 WBP2Q969T9 261 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 TIMD4Q96H15 378 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 REEP6Q96HR9 211 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 OR8B4Q96RC9 309 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 S1PR3Q99500 378 aa6.34□□□□□ -1.39
CTNND1-236ENST00000533667 LOC105371267A0A1B0GV96 52 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 OR6C68A6NDL8 312 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 RFPL4AA6NLU0 287 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 RFPL4AL1F8VTS6 287 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 HS3ST1O14792 307 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 PHOX2AO14813 284 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 HEXAP06865 529 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 LIMS3P0CW19 117 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 LIMS4P0CW20 117 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 DEFA4P12838 97 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 GABRA4P48169 554 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 HMGA2P52926 109 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 ELLP55199 621 aaPredicted RBP6.34□□□□□ -1.4
CTNND1-236ENST00000533667 CLDN15P56746 228 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 GPNMBQ14956 572 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 TIGITQ495A1 244 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 TMEM240Q5SV17 173 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 GLDNQ6ZMI3 551 aaPredicted RBP6.34□□□□□ -1.4
CTNND1-236ENST00000533667 DBX2Q6ZNG2 339 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 ZDHHC23Q8IYP9 409 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 UBAC2Q8NBM4 344 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 OR4C16Q8NGL9 310 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 TMEM18Q96B42 140 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 SPSB1Q96BD6 273 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 SLIRPQ9GZT3 109 aaKnown RBP6.34□□□□□ -1.4
CTNND1-236ENST00000533667 LANCL2Q9NS86 450 aa6.34□□□□□ -1.4
CTNND1-236ENST00000533667 GDF2Q9UK05 429 aaPredicted RBP6.34□□□□□ -1.4
CTNND1-236ENST00000533667 PPP1R3CQ9UQK1 317 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms