RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 XKRYO14609 159 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 SLC16A7O60669 478 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 KHDRBS3O75525 346 aaKnown RBP6.32□□□□□ -1.4
NXF1-215ENST00000533440 DUS4LO95620 317 aaKnown RBP6.32□□□□□ -1.4
NXF1-215ENST00000533440 NHLRC4P0CG21 123 aaPredicted RBP6.32□□□□□ -1.4
NXF1-215ENST00000533440 AMY2BP19961 511 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 SLC9A3P48764 834 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 TGM4P49221 684 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 GZMMP51124 257 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 MTPNP58546 118 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 SLC35A2P78381 396 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 MALLQ13021 153 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 PCK2Q16822 640 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 MICBQ29980 383 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 SLC36A1Q7Z2H8 476 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 OAFQ86UD1 273 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 NAA40Q86UY6 237 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 C11orf53Q8IXP5 236 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 MICU2Q8IYU8 434 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 FAM216BQ8N7L0 139 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 DDOQ99489 341 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 CGREF1Q99674 301 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 SYT4Q9H2B2 425 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 METTL8Q9H825 291 aaKnown RBP6.32□□□□□ -1.4
NXF1-215ENST00000533440 RNPEPL1Q9HAU8 725 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 VSX1Q9NZR4 365 aaPredicted RBP6.32□□□□□ -1.4
NXF1-215ENST00000533440 MRPL15Q9P015 296 aaKnown RBP6.32□□□□□ -1.4
NXF1-215ENST00000533440 RPS6KA6Q9UK32 745 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 NDUFAF1Q9Y375 327 aa6.32□□□□□ -1.4
NXF1-215ENST00000533440 SF3B6Q9Y3B4 125 aaKnown RBP6.32□□□□□ -1.4
NXF1-215ENST00000533440 CSMD3Q7Z407 3707 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 hCG_1807616A0A1W2PRN6 198 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 A6NLC8 198 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 EFCAB9A8MZ26 197 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 F5H5K5 113 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 IMPA2O14732 288 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 ACOT8O14734 319 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 NDUFB3O43676 98 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 LCATP04180 440 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 GRPP07492 148 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 PAX6P26367 422 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 RPL4P36578 427 aaKnown RBP6.31□□□□□ -1.4
NXF1-215ENST00000533440 BMXP51813 675 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 CD83Q01151 205 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 PRKCDQ05655 676 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 ST3GAL3Q11203 375 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 DCTN2Q13561 401 aaKnown RBP6.31□□□□□ -1.4
NXF1-215ENST00000533440 VMACQ2NL98 169 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 ATPAF1Q5TC12 328 aaPredicted RBP6.31□□□□□ -1.4
NXF1-215ENST00000533440 PGM2L1Q6PCE3 622 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 CORO6Q6QEF8 472 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 MRPL21Q7Z2W9 205 aaKnown RBP6.31□□□□□ -1.4
NXF1-215ENST00000533440 DHDDSQ86SQ9 333 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 NRMQ8IXM6 262 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 DPP10Q8N608 796 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 ANKRD42Q8N9B4 389 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 OR13C2Q8NGS9 318 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 OR10A6Q8NH74 314 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 C12orf43Q96C57 262 aaKnown RBP6.31□□□□□ -1.4
NXF1-215ENST00000533440 ZNF570Q96NI8 536 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 NKX3-1Q99801 234 aaPredicted RBP6.31□□□□□ -1.4
NXF1-215ENST00000533440 CDCA4Q9BXL8 241 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 NUAK2Q9H093 628 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 NMNAT1Q9HAN9 279 aaPredicted RBP6.31□□□□□ -1.4
NXF1-215ENST00000533440 ADA2Q9NZK5 511 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 BAG5Q9UL15 447 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 A4GNTQ9UNA3 340 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 POLR1DQ9Y2S0 133 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 U3KQK5 164 aa6.31□□□□□ -1.4
NXF1-215ENST00000533440 CDC42EP2O14613 210 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 PF4V1P10720 104 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 SELLP14151 372 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 SDHAP31040 664 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 HOXD3P31249 432 aaPredicted RBP6.3□□□□□ -1.4
NXF1-215ENST00000533440 MDH1P40925 334 aaKnown RBP6.3□□□□□ -1.4
NXF1-215ENST00000533440 OR1E2P47887 323 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 VSNL1P62760 191 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 ZNF92Q03936 586 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 MZT1Q08AG7 82 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 TRAP1Q12931 704 aaKnown RBP6.3□□□□□ -1.4
NXF1-215ENST00000533440 ECH1Q13011 328 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 IKZF1Q13422 519 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 KRR1Q13601 381 aaKnown RBP6.3□□□□□ -1.4
NXF1-215ENST00000533440 MEP1BQ16820 701 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 ZBED5Q49AG3 693 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 AGKQ53H12 422 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 LRRC10Q5BKY1 277 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 STUMQ69YW2 141 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 SLC18B1Q6NT16 456 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 WDR82Q6UXN9 313 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 CFAP77Q6ZQR2 320 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 PTCHD4Q6ZW05 846 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 TSEN54Q7Z6J9 526 aaKnown RBP6.3□□□□□ -1.4
NXF1-215ENST00000533440 WDR86Q86TI4 376 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 OR5D13Q8NGL4 314 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 LRRC29Q8WV35 223 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 SEH1LQ96EE3 360 aa6.3□□□□□ -1.4
NXF1-215ENST00000533440 PRRC1Q96M27 445 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms