RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 C12orf43Q96C57 262 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 PKNOX2Q96KN3 472 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 COPS7BQ9H9Q2 264 aaPredicted RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 SIRT7Q9NRC8 400 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 PSME2Q9UL46 239 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 NUBP2Q9Y5Y2 271 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 IGKV1-6A0A0C4DH72 117 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 M0R3G1 203 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 SCDO00767 359 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 DBIP07108 87 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 NHLRC4P0CG21 123 aaPredicted RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 BMP4P12644 408 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 CPA3P15088 417 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 CCNA2P20248 432 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 AHCYP23526 432 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 OR3A1P47881 315 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 RPL23AP62750 156 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 CSNK2A1P68400 391 aaPredicted RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 ZNF45Q02386 682 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ALG10BQ5I7T1 473 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 PVRIGQ6DKI7 326 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ULK3Q6PHR2 472 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 SLC15A3Q8IY34 581 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 Q8NAQ8 132 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 MRAPQ8TCY5 172 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 LRRC45Q96CN5 670 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 CMBLQ96DG6 245 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 PRPF18Q99633 342 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 SYT4Q9H2B2 425 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 MBNL3Q9NUK0 354 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 B9D1Q9UPM9 204 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 GMPPBQ9Y5P6 360 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 CLDN25C9JDP6 229 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 M0R1W7 72 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 SC5DO75845 299 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 GAS8O95995 478 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 MT-ATP6P00846 226 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 TTRP02766 147 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 C8orf88P0DMB2 117 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ALOX5APP20292 161 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 PAX7P23759 505 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 IL12BP29460 328 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 NANOS3P60323 173 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 RPS3AP61247 264 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 STX1BP61266 288 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 CHRNB3Q05901 458 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 TGM3Q08188 693 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 BAMBIQ13145 260 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ODF3L2Q3SX64 289 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 AGBL2Q5U5Z8 902 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 NANOGP8Q6NSW7 305 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ALDH16A1Q8IZ83 802 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 XAGE5Q8WWM1 108 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 EXT2Q93063 718 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 RASD2Q96D21 266 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ZNF488Q96MN9 340 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 TECTBQ96PL2 329 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 NUDT16L1Q9BRJ7 211 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 TRIM54Q9BYV2 358 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 TOLLIPQ9H0E2 274 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 NANOGQ9H9S0 305 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ADPRHL2Q9NX46 363 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 PMF1-BGLAPU3KQ54 211 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 PRSS37A4D1T9 235 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 OOEPA6NGQ2 149 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 SPRY3O43610 288 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 CRCPO75575 148 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 KRT6AP02538 564 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 KRT6BP04259 564 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 CSN2P05814 226 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 HIST1H1CP16403 213 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 TAC1P20366 129 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 KRT6CP48668 564 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 KIR2DS1Q14954 304 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ZNF730Q6ZMV8 503 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 MSANTD1Q6ZTZ1 278 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 MOGAT3Q86VF5 341 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 RANBP3LQ86VV4 465 aaPredicted RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 OSR2Q8N2R0 312 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ZNF645Q8N7E2 425 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 DDB2Q92466 427 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 PPCDCQ96CD2 204 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 RBM14Q96PK6 669 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 ALX4Q9H161 411 aaPredicted RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 ABCG5Q9H222 651 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 PPIL3Q9H2H8 161 aaKnown RBP1.24□□□□□ -2.21
KNL1-211ENST00000533001 WDR41Q9HAD4 459 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 ZNF286AQ9HBT8 521 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 DUSP13Q9UII6 198 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 U3KQV3 271 aa1.24□□□□□ -2.21
KNL1-211ENST00000533001 A0A096LPI6 279 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 A0A0G2JPF8 293 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CCDC182A6NF36 153 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 HNRNPCL2B2RXH8 293 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 HNRNPCL3B7ZW38 293 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 H3BQF6 201 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 CLIC1O00299 241 aa1.23□□□□□ -2.21
KNL1-211ENST00000533001 PPIHO43447 177 aaKnown RBP1.23□□□□□ -2.21
KNL1-211ENST00000533001 OR2T1O43869 369 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms