RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 SIDT2Q8NBJ9 832 aaKnown RBP4.93□□□□□ -1.62
CD44-231ENST00000531110 GPR26Q8NDV2 337 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 CSNK2A3Q8NEV1 391 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 OR7G2Q8NG99 324 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 OR10H4Q8NGA5 316 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 OR4S1Q8NGB4 309 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 OR4D6Q8NGJ1 314 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 OR8J1Q8NGP2 316 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 OR9I1Q8NGQ6 314 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 CASTOR1Q8WTX7 329 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 DNAJB3Q8WWF6 145 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 IGSF21Q96ID5 467 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 C12orf42Q96LP6 360 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 YPEL4Q96NS1 127 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 TP53RKQ96S44 253 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 MIEN1Q9BRT3 115 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 CBWD1Q9BRT8 395 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 ATG101Q9BSB4 218 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 NPFFR1Q9GZQ6 430 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 CST9LQ9H4G1 147 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 PATZ1Q9HBE1 687 aaKnown RBP4.93□□□□□ -1.62
CD44-231ENST00000531110 EXOSC3Q9NQT5 275 aaKnown RBP4.93□□□□□ -1.62
CD44-231ENST00000531110 TUBG2Q9NRH3 451 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 C2orf42Q9NWW7 574 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 OR5AC2Q9NZP5 309 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 DOK5Q9P104 306 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 KIAA1456Q9P272 454 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 AMDHD2Q9Y303 409 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 EXOSC1Q9Y3B2 195 aaKnown RBP4.93□□□□□ -1.62
CD44-231ENST00000531110 TEX264Q9Y6I9 313 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 LRP6O75581 1613 aa4.93□□□□□ -1.62
CD44-231ENST00000531110 AFDNP55196 1824 aaKnown RBP4.93□□□□□ -1.62
CD44-231ENST00000531110 SIGLEC1Q9BZZ2 1709 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 IGHV2OR16-5A0A0B4J2B6 119 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 IFITM5A6NNB3 132 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 HIDE1A8MVS5 230 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 K7EQM0 130 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 OR7A17O14581 309 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 WNT9BO14905 357 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 CCL25O15444 150 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 GJB3O75712 270 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 BCHEP06276 602 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 HOXB7P09629 217 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 SMIM10L2AP0DMW4 78 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 SMIM10L2BP0DMW5 78 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 OR13C7P0DN81 318 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 PIPP12273 146 aaPredicted RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 AREGP15514 252 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ADCYAP1P18509 176 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 CXCL2P19875 107 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 GZMHP20718 246 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 GADD45AP24522 165 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ACP1P24666 158 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ELAVL4P26378 380 aaKnown RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 PSMB5P28074 263 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 CHATP28329 748 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 EPHA2P29317 976 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 CDKN2AP42771 156 aaKnown RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 CSNK1A1P48729 337 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 INPP1P49441 399 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 RAB7AP51149 207 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 FAM3AP98173 230 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 HOXC5Q00444 222 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 CDK5Q00535 292 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ZFP36L1Q07352 338 aaKnown RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 PJVKQ0ZLH3 352 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 PCK2Q16822 640 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 GSG1Q2KHT4 349 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 SLC22A6Q4U2R8 563 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ELFN2Q5R3F8 820 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 TMEM198Q66K66 360 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 TMEM42Q69YG0 159 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 INO80CQ6PI98 192 aaPredicted RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 SMARCD3Q6STE5 483 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ENPP6Q6UWR7 440 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 PTAR1Q7Z6K3 402 aaPredicted RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 TBC1D26Q86UD7 250 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 SLC47A2Q86VL8 602 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 GABRG1Q8N1C3 465 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 GTPBP8Q8N3Z3 284 aaPredicted RBP4.92□□□□□ -1.62
CD44-231ENST00000531110 C11orf42Q8N5U0 333 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 FAM86B1Q8N7N1 296 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 COLGALT1Q8NBJ5 622 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 SLC30A7Q8NEW0 376 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 OR4D9Q8NGE8 314 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 OR5A2Q8NGI9 324 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 OR4P4Q8NGL7 312 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 GNPDA2Q8TDQ7 276 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 PNPLA2Q96AD5 504 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ELMOD3Q96FG2 381 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 DTD2Q96FN9 168 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ITCHQ96J02 903 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 TEX37Q96LM6 180 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 HARBI1Q96MB7 349 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 CCDC115Q96NT0 180 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 NECTIN4Q96NY8 510 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 ZNF607Q96SK3 696 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 MBOAT4Q96T53 435 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 SUCNR1Q9BXA5 334 aa4.92□□□□□ -1.62
CD44-231ENST00000531110 TLNRD1Q9H1K6 362 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms