RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 OR10H3O60404 316 aa19.44■□□□□ 0.7
CPSF1-202ENST00000527827 HLA-DQA2P01906 255 aa19.44■□□□□ 0.7
CPSF1-202ENST00000527827 OTX1P32242 354 aaPredicted RBP19.44■□□□□ 0.7
CPSF1-202ENST00000527827 GLYATL3Q5SZD4 288 aa19.44■□□□□ 0.7
CPSF1-202ENST00000527827 PDZD9Q8IXQ8 264 aa19.44■□□□□ 0.7
CPSF1-202ENST00000527827 SCCPDHQ8NBX0 429 aa19.44■□□□□ 0.7
CPSF1-202ENST00000527827 SDR9C7Q8NEX9 313 aa19.44■□□□□ 0.7
CPSF1-202ENST00000527827 SPTSSAQ969W0 71 aa19.44■□□□□ 0.7
CPSF1-202ENST00000527827 DCAF13Q9NV06 445 aaKnown RBP19.44■□□□□ 0.7
CPSF1-202ENST00000527827 MRPL15Q9P015 296 aaKnown RBP19.44■□□□□ 0.7
CPSF1-202ENST00000527827 ABCD2Q9UBJ2 740 aa19.44■□□□□ 0.7
CPSF1-202ENST00000527827 SLC22A31A6NKX4 558 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 SASH3O75995 380 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 TSPAN15O95858 294 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 LHBP01229 141 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 GRPP07492 148 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 RPS27P42677 84 aaKnown RBP19.43■□□□□ 0.7
CPSF1-202ENST00000527827 POU4F2Q12837 409 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 C11orf91Q3C1V1 193 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 HACD2Q6Y1H2 254 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 Q6ZSV7 163 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 FGFRL1Q8N441 504 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 ZSCAN4Q8NAM6 433 aaPredicted RBP19.43■□□□□ 0.7
CPSF1-202ENST00000527827 EFCAB1Q9HAE3 211 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 KAAG1Q9UBP8 84 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 KCNG2Q9UJ96 466 aa19.43■□□□□ 0.7
CPSF1-202ENST00000527827 IGHV3OR15-7A0A075B7D8 119 aa19.42■□□□□ 0.7
CPSF1-202ENST00000527827 ECDO95905 644 aaPredicted RBP19.42■□□□□ 0.7
CPSF1-202ENST00000527827 PSKH1P11801 424 aa19.42■□□□□ 0.7
CPSF1-202ENST00000527827 TEX36Q5VZQ5 186 aa19.42■□□□□ 0.7
CPSF1-202ENST00000527827 GLYATQ6IB77 296 aa19.42■□□□□ 0.7
CPSF1-202ENST00000527827 SPERTQ8NA61 448 aa19.42■□□□□ 0.7
CPSF1-202ENST00000527827 CNTD2Q9H8S5 307 aa19.42■□□□□ 0.7
CPSF1-202ENST00000527827 TCF7L1Q9HCS4 588 aa19.42■□□□□ 0.7
CPSF1-202ENST00000527827 RPUSD1Q9UJJ7 312 aaKnown RBP19.42■□□□□ 0.7
CPSF1-202ENST00000527827 SAMD4AQ9UPU9 718 aaKnown RBP19.42■□□□□ 0.7
CPSF1-202ENST00000527827 A0A1B0GW55 424 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 A6NLC8 198 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 NDUFAB1O14561 156 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 IDH3BO43837 385 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DUX4L2P0CJ85 424 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DUX4L3P0CJ86 424 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DUX4L4P0CJ87 422 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DUX4L5P0CJ88 424 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DUX4L6P0CJ89 424 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DUX4L7P0CJ90 424 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 ZNF823P16415 610 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 NOS3P29474 1203 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 PYCR1P32322 319 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 NUDT2P50583 147 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 ELF3P78545 371 aaPredicted RBP19.41■□□□□ 0.7
CPSF1-202ENST00000527827 KRT72Q14CN4 511 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 SLC35F1Q5T1Q4 408 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DUX4L9Q6RFH8 374 aaPredicted RBP19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DRAM2Q6UX65 266 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 GDPGP1Q6ZNW5 385 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 VMO1Q7Z5L0 202 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 C1QL4Q86Z23 238 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 OR56B2PQ8NGI1 322 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 ZNRF4Q8WWF5 429 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 ST8SIA4Q92187 359 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DPAGT1Q9H3H5 408 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 C16orf95Q9H693 158 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 ADA2Q9NZK5 511 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 DUX4Q9UBX2 424 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 KPTNQ9Y664 436 aa19.41■□□□□ 0.7
CPSF1-202ENST00000527827 hCG_1807616A0A1W2PRN6 198 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 GADD45GO95257 159 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 SEMG1P04279 462 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 GSSP48637 474 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.4■□□□□ 0.7
CPSF1-202ENST00000527827 CDONQ4KMG0 1287 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 LYPD4Q6UWN0 246 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 C11orf53Q8IXP5 236 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 LY6G5BQ8NDX9 201 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 DDOQ99489 341 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 SEMA6AQ9H2E6 1030 aa19.4■□□□□ 0.7
CPSF1-202ENST00000527827 TVP23AA6NH52 213 aa19.39■□□□□ 0.69
CPSF1-202ENST00000527827 BHLHE40O14503 412 aa19.39■□□□□ 0.69
CPSF1-202ENST00000527827 H2AFXP16104 143 aaPredicted RBP19.39■□□□□ 0.69
CPSF1-202ENST00000527827 SMIM11AP58511 58 aa19.39■□□□□ 0.69
CPSF1-202ENST00000527827 PSME3P61289 254 aa19.39■□□□□ 0.69
CPSF1-202ENST00000527827 SPIBQ01892 262 aa19.39■□□□□ 0.69
CPSF1-202ENST00000527827 WDR86Q86TI4 376 aa19.39■□□□□ 0.69
CPSF1-202ENST00000527827 LNX2Q8N448 690 aa19.39■□□□□ 0.69
CPSF1-202ENST00000527827 NSRP1Q9H0G5 558 aaKnown RBP19.39■□□□□ 0.69
CPSF1-202ENST00000527827 V9GYQ6 96 aa19.39■□□□□ 0.69
CPSF1-202ENST00000527827 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.38■□□□□ 0.69
CPSF1-202ENST00000527827 A0A1B0GVI7 797 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 SLC2A1P11166 492 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 PRKXP51817 358 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 MZT1Q08AG7 82 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 PCK2Q16822 640 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 DCXRQ7Z4W1 244 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 CYB561A3Q8NBI2 242 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 LRTOMTQ8WZ04 291 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 CCL13Q99616 98 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 C14orf119Q9NWQ9 140 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 ZNRD1Q9P1U0 126 aa19.38■□□□□ 0.69
CPSF1-202ENST00000527827 FAM96BQ9Y3D0 163 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms