RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 IGLV8-61A0A075B6I0 122 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 IGKV3D-11A0A0A0MRZ8 115 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 IGHV1-45A0A0A0MS14 117 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 A0A0A6YYD5 115 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 TMEM120BA0PK00 339 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 FAM74A7A6NL05 159 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 LRRC30A6NM36 301 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 IDSB3KWA1 339 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 K7EM74 188 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 PSMD12O00232 456 aaPredicted RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 MANBAO00462 879 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 PLPP1O14494 284 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 LSM1O15116 133 aaKnown RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 TM9SF1O15321 606 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ATP8B1O43520 1251 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 RAMP1O60894 148 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 B4GALT2O60909 372 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 TRIM3O75382 744 aaPredicted RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 EEDO75530 441 aaKnown RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 SEMA3DO95025 777 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 AIFM1O95831 613 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 PDYNP01213 254 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 KRT6AP02538 564 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 KRT6BP04259 564 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 HEXBP07686 556 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 BPGMP07738 259 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 RNH1P13489 461 aaKnown RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 HPGDP15428 266 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 CD1EP15812 388 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 PSMB1P20618 241 aaKnown RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 HIST1H1TP22492 207 aaPredicted RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 IGHV1-2P23083 117 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ATP5A1P25705 553 aaKnown RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 DPP4P27487 766 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 HMOX2P30519 316 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 SSR2P43308 183 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 KRT6CP48668 564 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 RAP1GDS1P52306 607 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 EMP2P54851 167 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 LIM2P55344 173 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 PKNOX1P55347 436 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 MAGOHP61326 146 aaKnown RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 NAA20P61599 178 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 BTG2P78543 158 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 HMGCS1Q01581 520 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 TNFRSF17Q02223 184 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 TGM3Q08188 693 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 FUT7Q11130 342 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 TRIP10Q15642 601 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 FAM74A3Q4VXF1 159 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 PRR30Q53SZ7 412 aaPredicted RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 TTMPQ5BVD1 217 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 DCST2Q5T1A1 773 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 AGBL2Q5U5Z8 902 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ZNF57Q68EA5 555 aaPredicted RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 CLEC6AQ6EIG7 209 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 NIPAL1Q6NVV3 410 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 TMEM205Q6UW68 189 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 C6orf89Q6UWU4 347 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ARSKQ6UWY0 536 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 LANCL3Q6ZV70 420 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ANKRD37Q7Z713 158 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ZCCHC7Q8N3Z6 543 aaKnown RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 C11orf42Q8N5U0 333 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 CCNYL1Q8N7R7 359 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ACOT4Q8N9L9 421 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 NFAM1Q8NET5 270 aaPredicted RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 OR11G2Q8NGC1 345 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 OR13F1Q8NGS4 319 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 OR8K3Q8NH51 312 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 IL1F10Q8WWZ1 152 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 MARC2Q969Z3 335 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 TLCD1Q96CP7 247 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 CCDC126Q96EE4 140 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 PHYHIPLQ96FC7 376 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 CMTM7Q96FZ5 175 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ATP6V1G3Q96LB4 118 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 SERPINI1Q99574 410 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 CGREF1Q99674 301 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 CCT7Q99832 543 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 SHCBP1LQ9BZQ2 653 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 TRIM4Q9C037 500 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ROGDIQ9GZN7 287 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ELOVL6Q9H5J4 265 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 PRTFDC1Q9NRG1 225 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 VNN3Q9NY84 501 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 EHFQ9NZC4 300 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 EMC3Q9P0I2 261 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ACTR3BQ9P1U1 418 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 C3orf18Q9UK00 162 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 PAIP2BQ9ULR5 123 aaKnown RBP2.82□□□□□ -1.96
CD44-219ENST00000525685 SNX6Q9UNH7 406 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 FIS1Q9Y3D6 152 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 MMACHCQ9Y4U1 282 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 ATRXP46100 2492 aa2.82□□□□□ -1.96
CD44-219ENST00000525685 SPTBN4Q9H254 2564 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 NSG1A0A0A6YYJ2 146 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 LOC100653049A0A140TA62 436 aa2.81□□□□□ -1.96
CD44-219ENST00000525685 SAGE2PA6NJ88 616 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms