RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 BSCL2Q96G97 398 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 GSN-AS1Q9NRJ2 163 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 TMEM100Q9NV29 134 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 DZANK1Q9NVP4 752 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 VDAC3Q9Y277 283 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 TRAV36DV7A0A075B6V5 113 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 TMED7-TICAM2A0A0A6YYA0 188 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 C5orf63A6NC05 138 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 H3BML4 177 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 SCGB1D2O95969 90 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 HNRNPA2B1P22626 353 aaKnown RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 IL12BP29460 328 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 CDAP32320 146 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 GLO1Q04760 184 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 SSBP1Q04837 148 aaKnown RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 MYO7BQ6PIF6 2116 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 MAMDC2Q7Z304 686 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 LIPHQ8WWY8 451 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF775Q96BV0 537 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 FAM71F1Q96KD3 344 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 TGM7Q96PF1 710 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 SULT4A1Q9BR01 284 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 TBL1XR1Q9BZK7 514 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 ADAM19Q9H013 955 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 A0A1W2PPH5 198 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 SYT7O43581 403 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 NME2P1O60361 137 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 HOXC4P09017 264 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 ASCL1P50553 236 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 PRSS12P56730 875 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 ROM1Q03395 351 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 SMCO1Q147U7 214 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 PRTGQ2VWP7 1150 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 FDX2Q6P4F2 183 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 GLIPR1L1Q6UWM5 242 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 ADAMTS18Q8TE60 1221 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 ARHGAP5-AS1Q96IT6 56 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 CDCA3Q99618 268 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 SEC11CQ9BY50 192 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 PDE7BQ9NP56 450 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 RAB22AQ9UL26 194 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 RFNGQ9Y644 331 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 DBX1A6NMT0 343 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 PHYHO14832 338 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 SRSF10O75494 262 aaKnown RBP11.69□□□□□ -0.54
CAPN1-202ENST00000524773 IL33O95760 270 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 TTRP02766 147 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 NQO2P16083 231 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 RAB6AP20340 208 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 ABCD3P28288 659 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 POU3F1Q03052 451 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-202ENST00000524773 FABP9Q0Z7S8 132 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 C1orf140Q5VVS0 124 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 CARD17Q5XLA6 110 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 ST7LQ8TDW4 575 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 ASB17Q8WXJ9 295 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 S1PR5Q9H228 398 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 TAF9BQ9HBM6 251 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 GHRLQ9UBU3 117 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 ZMAT5Q9UDW3 170 aaKnown RBP11.69□□□□□ -0.54
CAPN1-202ENST00000524773 BRWD1Q9NSI6 2320 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 ARPC4-TTLL3A0A0A6YYG9 625 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 NDUFS6O75380 124 aaKnown RBP11.69□□□□□ -0.54
CAPN1-202ENST00000524773 S100A6P06703 90 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 CTSEP14091 401 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 RORAP35398 523 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 FAM76BQ5HYJ3 339 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 C10orf91Q5T1B1 145 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF440Q8IYI8 595 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 NAXEQ8NCW5 288 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 SLCO5A1Q9H2Y9 848 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 TXNIPQ9H3M7 391 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 SEC61A2Q9H9S3 476 aa11.69□□□□□ -0.54
CAPN1-202ENST00000524773 MYOZ1Q9NP98 299 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-202ENST00000524773 M0R036 132 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 PLPP3O14495 311 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 GP1BBP13224 206 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF93P35789 620 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-202ENST00000524773 POLR2GP62487 172 aaKnown RBP eCLIP11.68□□□□□ -0.54
CAPN1-202ENST00000524773 ARFRP1Q13795 201 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 C1orf189Q5VU69 101 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 Q6ZRG5 221 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 HOGA1Q86XE5 327 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 LYPD6Q86Y78 171 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 TERB2Q8NHR7 220 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF319Q9P2F9 582 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 IGHV5-51A0A0C4DH38 117 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 PQLC2LA1A4F0 135 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 DHPSP49366 369 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-202ENST00000524773 CAV2P51636 162 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 TMEM50BP56557 158 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 QRFPP83859 136 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 SPEM2Q0P670 501 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 RAB30Q15771 203 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 SGCBQ16585 318 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 EIF2S3LQ2VIR3 472 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms