RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 FAM57BQ71RH2 274 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 KRT74Q7RTS7 529 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 RFLNBQ8N5W9 214 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 SPRYD4Q8WW59 207 aaPredicted RBP12.82□□□□□ -0.36
SF3B2-202ENST00000524475 YIPF5Q969M3 257 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 SGK3Q96BR1 496 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 REEP6Q96HR9 211 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 PGAM5Q96HS1 289 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 BPESC1Q9GZL8 116 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 TMEM100Q9NV29 134 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 MRPS18AQ9NVS2 196 aaKnown RBP12.82□□□□□ -0.36
SF3B2-202ENST00000524475 ZNF319Q9P2F9 582 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 NKX1-2Q9UD57 310 aaPredicted RBP12.82□□□□□ -0.36
SF3B2-202ENST00000524475 NUFIP1Q9UHK0 495 aaKnown RBP12.82□□□□□ -0.36
SF3B2-202ENST00000524475 EXOGQ9Y2C4 368 aaKnown RBP12.82□□□□□ -0.36
SF3B2-202ENST00000524475 HSPE1-MOB4S4R3N1 261 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 ZFHX3Q15911 3703 aa12.82□□□□□ -0.36
SF3B2-202ENST00000524475 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
SF3B2-202ENST00000524475 TMEM269A0A1B0GVZ9 245 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 A0A1W2PQL4 384 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-202ENST00000524475 H0YJX3 145 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 IFNL4K9M1U5 179 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 MLNRO43193 412 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 IGLV3-1P01715 115 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 ATP6V1B1P15313 513 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 USF1P22415 310 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-202ENST00000524475 COL8A2P25067 703 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 ATP6V1E1P36543 226 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 ISL1P61371 349 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 TNFAIP6P98066 277 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-202ENST00000524475 FAM3AP98173 230 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 ZNF91Q05481 1191 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 SLC3A1Q07837 685 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 OR5AS1Q8N127 324 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 DHRSXQ8N5I4 330 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 SETD9Q8NE22 299 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 OR2Z1Q8NG97 314 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 OR8B12Q8NGG6 310 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 RNFT2Q96EX2 444 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 MYCBPQ99417 103 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-202ENST00000524475 ADI1Q9BV57 179 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 ZNF275Q9NSD4 429 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-202ENST00000524475 MRM2Q9UI43 246 aaKnown RBP12.81□□□□□ -0.36
SF3B2-202ENST00000524475 IKZF2Q9UKS7 526 aa12.81□□□□□ -0.36
SF3B2-202ENST00000524475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.8□□□□□ -0.364e-6■□□□□ 8
SF3B2-202ENST00000524475 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 TPD52L2O43399 206 aaKnown RBP12.8□□□□□ -0.36
SF3B2-202ENST00000524475 TBX1O43435 398 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 GMDSO60547 372 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 LILRA1O75019 489 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 PTBP3O95758 552 aaKnown RBP12.8□□□□□ -0.36
SF3B2-202ENST00000524475 KRT8P05787 483 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 DBTP11182 482 aaKnown RBP12.8□□□□□ -0.36
SF3B2-202ENST00000524475 CD200P41217 278 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 GATA4P43694 442 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 SRP9P49458 86 aaKnown RBP12.8□□□□□ -0.36
SF3B2-202ENST00000524475 RAB40BQ12829 278 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 CARTPTQ16568 116 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 HFEQ30201 348 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 PLEKHG7Q6ZR37 379 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 SSX6Q7RTT6 188 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 KCTD20Q7Z5Y7 419 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 FTMTQ8N4E7 242 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 SPERTQ8NA61 448 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 BHLHE23Q8NDY6 225 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 CSNK2A3Q8NEV1 391 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 OR10H4Q8NGA5 316 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 OR56B2PQ8NGI1 322 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 APH1BQ8WW43 257 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 ERGIC1Q969X5 290 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 MEGF10Q96KG7 1140 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 OR2V2Q96R30 315 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 RPL36Q9Y3U8 105 aaKnown RBP12.8□□□□□ -0.36
SF3B2-202ENST00000524475 R4GMQ9 66 aa12.8□□□□□ -0.36
SF3B2-202ENST00000524475 ANK3Q12955 4377 aaKnown RBP12.79□□□□□ -0.36
SF3B2-202ENST00000524475 METTL15A6NJ78 407 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 LYNX1G3V0Z9 82 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 H0YHG0 523 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 PSMD9O00233 223 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 WBP4O75554 376 aaKnown RBP12.79□□□□□ -0.36
SF3B2-202ENST00000524475 IGHA1P01876 353 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 LYNX1P0DP58 116 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 CAPGP40121 348 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 GPR6P46095 362 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-202ENST00000524475 GSK3AP49840 483 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 ZNF85Q03923 595 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 RIPK1Q13546 671 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 ZNF181Q2M3W8 571 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 Q6ZSR3 168 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 ACBD7Q8N6N7 88 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 CYGBQ8WWM9 190 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 LGALS12Q96DT0 336 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 JAM3Q9BX67 310 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 PBOV1Q9GZY1 135 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 ABCB9Q9NP78 766 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 BRD7Q9NPI1 651 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 INPP5EQ9NRR6 644 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 N6AMT1Q9Y5N5 214 aa12.79□□□□□ -0.36
SF3B2-202ENST00000524475 SNX5Q9Y5X3 404 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms