RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 MMP7P09237 267 aaPredicted RBP8.72□□□□□ -1.01
VPS13B-212ENST00000524330 NTF4P34130 210 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 GSK3AP49840 483 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 CLDN12P56749 244 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 RAB1AP62820 205 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 DYRK1AQ13627 763 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 GPR176Q14439 515 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 GSG1Q2KHT4 349 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 KRTAP27-1Q3LI81 207 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 C1QTNF12Q5T7M4 302 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 AWAT2Q6E213 333 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 ZNF529Q6P280 563 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 ZNF585AQ6P3V2 769 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 INO80CQ6PI98 192 aaPredicted RBP8.72□□□□□ -1.01
VPS13B-212ENST00000524330 PRSS45Q7RTY3 260 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 CDH24Q86UP0 819 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 SIAH3Q8IW03 269 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 ZNF101Q8IZC7 436 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 C1orf162Q8NEQ5 155 aaPredicted RBP8.72□□□□□ -1.01
VPS13B-212ENST00000524330 CSNK2A3Q8NEV1 391 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 KCNG3Q8TAE7 436 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 ADAT3Q96EY9 351 aaPredicted RBP8.72□□□□□ -1.01
VPS13B-212ENST00000524330 ZC3HAV1LQ96H79 300 aaKnown RBP8.72□□□□□ -1.01
VPS13B-212ENST00000524330 CHST5Q9GZS9 411 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 CST11Q9H112 138 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 SCPEP1Q9HB40 452 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 OBP2BQ9NPH6 170 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 RBFOX1Q9NWB1 397 aaKnown RBP8.72□□□□□ -1.01
VPS13B-212ENST00000524330 EIF3KQ9UBQ5 218 aaKnown RBP8.72□□□□□ -1.01
VPS13B-212ENST00000524330 FBLN5Q9UBX5 448 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 PROCRQ9UNN8 238 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 PIGLQ9Y2B2 252 aa8.72□□□□□ -1.01
VPS13B-212ENST00000524330 FAM186AA6NE01 2351 aa8.71□□□□□ -1.01
VPS13B-212ENST00000524330 MUC6Q6W4X9 2439 aa8.71□□□□□ -1.01
VPS13B-212ENST00000524330 MED12Q93074 2177 aa8.71□□□□□ -1.01
VPS13B-212ENST00000524330 A0A087WV48 116 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 A0A096LPE4 126 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 A0A0B4J203 849 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 TMEM272A0A1B0GTI8 110 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 A0A1W2PPZ6 126 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 FUOMA2VDF0 154 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 GGT3PA6NGU5 568 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 ORC5O43913 435 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 IL2RAP01589 272 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 ITGA5P08648 1049 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 PRF1P14222 555 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 ABOP16442 354 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 CDK2P24941 298 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 STOMP27105 288 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 HOXD11P31277 338 aaPredicted RBP8.71□□□□□ -1.02
VPS13B-212ENST00000524330 TAS2R20P59543 309 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 ACTBP60709 375 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 ACTG1P63261 375 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 RBPJQ06330 500 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 TBC1D28Q2M2D7 210 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 ACSF3Q4G176 576 aaPredicted RBP8.71□□□□□ -1.02
VPS13B-212ENST00000524330 CLVS2Q5SYC1 327 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 C1orf185Q5T7R7 199 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 RSBN1Q5VWQ0 802 aaPredicted RBP8.71□□□□□ -1.02
VPS13B-212ENST00000524330 FAM166AQ6J272 317 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 Q6ZT83 130 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 LHFPL2Q6ZUX7 228 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 GDPD3Q7L5L3 318 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 KRT74Q7RTS7 529 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 MRPL21Q7Z2W9 205 aaKnown RBP8.71□□□□□ -1.02
VPS13B-212ENST00000524330 ZNF554Q86TJ5 538 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 CNEP1R1Q8N9A8 125 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 STEAP2Q8NFT2 490 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 SGK3Q96BR1 496 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 ITPKCQ96DU7 683 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 SLC25A38Q96DW6 304 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 NUDT16L1Q9BRJ7 211 aaKnown RBP8.71□□□□□ -1.02
VPS13B-212ENST00000524330 C1QTNF5Q9BXJ0 243 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 DPAGT1Q9H3H5 408 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 NPAP1Q9NZP6 1156 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 CGGBP1Q9UFW8 167 aaPredicted RBP8.71□□□□□ -1.02
VPS13B-212ENST00000524330 KCNN3Q9UGI6 736 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 PRSS50Q9UI38 385 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 TBC1D24Q9ULP9 559 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 MRPS28Q9Y2Q9 187 aaKnown RBP8.71□□□□□ -1.02
VPS13B-212ENST00000524330 CACNG2Q9Y698 323 aa8.71□□□□□ -1.02
VPS13B-212ENST00000524330 CNOT1A5YKK6 2376 aaKnown RBP8.7□□□□□ -1.02
VPS13B-212ENST00000524330 PHF3Q92576 2039 aaKnown RBP8.7□□□□□ -1.02
VPS13B-212ENST00000524330 ZNF816-ZNF321PA0A0X1KG74 233 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 PRRG2O14669 202 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 ZNF780AO75290 641 aaPredicted RBP8.7□□□□□ -1.02
VPS13B-212ENST00000524330 CTAG2O75638 210 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 DHFRP00374 187 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 TPOP07202 933 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 DBHP09172 617 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 CSF1P09603 554 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 SPINK2P20155 84 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 TUBG1P23258 451 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 PRSS3P35030 304 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 ATP1B3P54709 279 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 MADCAM1Q13477 382 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 P2RY6Q15077 328 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 TBR1Q16650 682 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 TBRG1Q3YBR2 411 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 C9orf135Q5VTT2 229 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms