RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ROBO1Q9Y6N7 1651 aa7.43□□□□□ -1.22
HMGB4-204ENST00000522796 A0A1B0GTL3 188 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 OR5B21A6NL26 309 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 TNFRSF6BO95407 300 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 GPR75O95800 540 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 LAMP2P13473 410 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SOX18P35713 384 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SLC6A8P48029 635 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 AGTR2P50052 363 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 LBX1P52954 281 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 OR12D2P58182 307 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 HIST1H3AP68431 136 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 INSL4Q14641 139 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 EXT1Q16394 746 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 DUSP5Q16690 384 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 C4orf17Q53FE4 359 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 RAB41Q5JT25 222 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 LYPLAL1Q5VWZ2 237 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 TRNP1Q6NT89 227 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 CMTM8Q8IZV2 173 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SLC38A9Q8NBW4 561 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 OR4K17Q8NGC6 315 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 PPP1R1CQ8WVI7 109 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 NDRG1Q92597 394 aaKnown RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 IMP4Q96G21 291 aaKnown RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 TBX15Q96SF7 602 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SNRNP25Q9BV90 132 aaKnown RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SLC17A9Q9BYT1 436 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 TPSD1Q9BZJ3 242 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 YBX2Q9Y2T7 364 aaKnown RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 TNRC6CQ9HCJ0 1690 aaKnown RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 LOC100509620A0A075B734 347 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 ZNF208O43345 1280 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 PDE6DO43924 150 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 GLSO94925 669 aaPredicted RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 CD160O95971 181 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 LIMS3P0CW19 117 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 LIMS4P0CW20 117 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SMIM10L1P0DMW3 83 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 OSMP13725 252 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 ST6GAL1P15907 406 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 EPCAMP16422 314 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 DUSP1P28562 367 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 PTH2RP49190 550 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 HMGA2P52926 109 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 RAB38P57729 211 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 ATXN7L3Q14CW9 347 aaPredicted RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 EBPQ15125 230 aaKnown RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 UBE2NLQ5JXB2 153 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SPANXN4Q5MJ08 99 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 NCBP2-AS2Q69YL0 99 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 ASPHD2Q6ICH7 369 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 NIT1Q86X76 327 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 GPD1LQ8N335 351 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SLC7A13Q8TCU3 470 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 NUDT8Q8WV74 236 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 GEMIN6Q8WXD5 167 aaKnown RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SMIM10Q96HG1 83 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 ORAI2Q96SN7 254 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 CHRDL1Q9BU40 450 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 DOHHQ9BU89 302 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SSBP4Q9BWG4 385 aaPredicted RBP7.42□□□□□ -1.22
HMGB4-204ENST00000522796 NIF3L1Q9GZT8 377 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SMDT1Q9H4I9 107 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 CLMPQ9H6B4 373 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 APMAPQ9HDC9 416 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 SLC17A5Q9NRA2 495 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 LAMTOR2Q9Y2Q5 125 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 HCFC2Q9Y5Z7 792 aa7.42□□□□□ -1.22
HMGB4-204ENST00000522796 A0A0B4J2A0 478 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 WIPF3A6NGB9 483 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 C2CD4BA6NLJ0 364 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ZNF727A8MUV8 499 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 RBFOX2O43251 390 aaKnown RBP eCLIP7.41□□□□□ -1.22
HMGB4-204ENST00000522796 FCMRO60667 390 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 PSG1P11464 419 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 AMD1P17707 334 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 OPRD1P41143 372 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ERVPABLB-1P60509 514 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SNRPD1P62314 119 aaKnown RBP7.41□□□□□ -1.22
HMGB4-204ENST00000522796 BAXQ07812 192 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ZP4Q12836 540 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SRSF6Q13247 344 aaKnown RBP7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SGCBQ16585 318 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SRSF7Q16629 238 aaKnown RBP eCLIP7.41□□□□□ -1.22
HMGB4-204ENST00000522796 GALNT16Q8N428 558 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SMIM20Q8N5G0 67 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 TCEANCQ8N8B7 351 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ACOT4Q8N9L9 421 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ZNF519Q8TB69 540 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 CFHR4Q92496 578 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 MOAP1Q96BY2 351 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SLC25A38Q96DW6 304 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 RAX2Q96IS3 184 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 TIMM29Q9BSF4 260 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 GREM2Q9H772 168 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 ELL3Q9HB65 397 aaPredicted RBP7.41□□□□□ -1.22
HMGB4-204ENST00000522796 TMEM38BQ9NVV0 291 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 FRRS1LQ9P0K9 344 aa7.41□□□□□ -1.22
HMGB4-204ENST00000522796 SHPKQ9UHJ6 478 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms