RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 RNASE8Q8TDE3 154 aaKnown RBP12.1□□□□□ -0.47
PABPC1-208ENST00000519004 CMBLQ96DG6 245 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 TSSK2Q96PF2 358 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 CMKLR1Q99788 373 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 CDH20Q9HBT6 801 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 COLEC10Q9Y6Z7 277 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 V9GYS6 101 aa12.1□□□□□ -0.47
PABPC1-208ENST00000519004 A0A1B0GWA3 101 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 PRH1P02810 166 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 DBIP07108 87 aaKnown RBP12.09□□□□□ -0.47
PABPC1-208ENST00000519004 SRP19P09132 144 aaKnown RBP12.09□□□□□ -0.47
PABPC1-208ENST00000519004 MMP7P09237 267 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-208ENST00000519004 TBPP20226 339 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 RPL4P36578 427 aaKnown RBP12.09□□□□□ -0.47
PABPC1-208ENST00000519004 SOX8P57073 446 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 C22orf39Q6P5X5 142 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 ZNF619Q8N2I2 560 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 APCDD1LQ8NCL9 501 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 OR52E1Q8NGJ3 308 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 OR5AR1Q8NGP9 310 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 METTL21AQ8WXB1 218 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 KXD1Q9BQD3 176 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 GINS3Q9BRX5 216 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 WFDC1Q9HC57 220 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 PARD6AQ9NPB6 346 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 FBXO34Q9NWN3 711 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 GAB2Q9UQC2 676 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 HEATR5BQ9P2D3 2071 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 DHRS7CA6NNS2 312 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 ITGB1BP1O14713 200 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 TCF21O43680 179 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 GIMD1P0DJR0 217 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 BTG2P78543 158 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 CEBPEQ15744 281 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 PCK2Q16822 640 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 C1orf194Q5T5A4 169 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 TMEM225Q6GV28 225 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 ZNF429Q86V71 674 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 TMEM156Q8N614 296 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 C22orf15Q8WYQ4 148 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 DNASE2BQ8WZ79 361 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 TVP23CQ96ET8 276 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 MACROD1Q9BQ69 325 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 SH3BGRL3Q9H299 93 aa12.09□□□□□ -0.47
PABPC1-208ENST00000519004 FTCDNL1E5RQL4 147 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 HSPA12AO43301 675 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 PI3P19957 117 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 FUT3P21217 361 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 CCL20P78556 96 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 DPY19L2P2Q6ZN68 376 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 MRPL52Q86TS9 123 aaKnown RBP12.08□□□□□ -0.48
PABPC1-208ENST00000519004 ZNF248Q8NDW4 579 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 OR10A7Q8NGE5 316 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 OR4X1Q8NH49 305 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 FIBINQ8TAL6 211 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 NKD1Q969G9 470 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 OR8D2Q9GZM6 311 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 GAL3ST2Q9H3Q3 398 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 TM7SF3Q9NS93 570 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 ARPC3O15145 178 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 NUDT21O43809 227 aaKnown RBP12.08□□□□□ -0.48
PABPC1-208ENST00000519004 DEDDO75618 318 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 IRF2P14316 349 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 SELEP16581 610 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 MDKP21741 143 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-208ENST00000519004 CDKN2AP42771 156 aaKnown RBP12.08□□□□□ -0.48
PABPC1-208ENST00000519004 GPR3P46089 330 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
PABPC1-208ENST00000519004 SMAD3P84022 425 aaKnown RBP12.08□□□□□ -0.48
PABPC1-208ENST00000519004 HSF1Q00613 529 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
PABPC1-208ENST00000519004 CSNK1A1LQ8N752 337 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 COX18Q8N8Q8 333 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 SVIPQ8NHG7 77 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 PRRX2Q99811 253 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 URM1Q9BTM9 101 aaKnown RBP12.08□□□□□ -0.48
PABPC1-208ENST00000519004 TAS2R4Q9NYW5 299 aa12.08□□□□□ -0.48
PABPC1-208ENST00000519004 K7N7A8 449 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 CLEC3AO75596 197 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 AGR2O95994 175 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 HIST1H1TP22492 207 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-208ENST00000519004 BRS3P32247 399 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 RPS27P42677 84 aaKnown RBP12.07□□□□□ -0.48
PABPC1-208ENST00000519004 RND2P52198 227 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 CEBPGP53567 150 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 PRPS1P60891 318 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 H3F3AP84243 136 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 EGR3Q06889 387 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 ENPP2Q13822 863 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 GALNTL5Q7Z4T8 443 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 THRSPQ92748 146 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 C5orf34Q96MH7 638 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 MEMO1Q9Y316 297 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 CEACAM18A8MTB9 384 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 GRM6O15303 877 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 SIAH2O43255 324 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 GUSBP08236 651 aa12.07□□□□□ -0.48
PABPC1-208ENST00000519004 FOXF1Q12946 379 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms